RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ZNF562Q6V9R5 426 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 TMEM217Q8N7C4 229 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 ZFP41Q8N8Y5 198 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 OR52L2PQ8NGH6 319 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 GPR148Q8TDV2 347 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 MUL1Q969V5 352 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 TMEM68Q96MH6 324 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 NEURL2Q9BR09 285 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 BANF2Q9H503 90 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 TAF9BQ9HBM6 251 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 OR2S2Q9NQN1 319 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 ZC4H2Q9NQZ6 224 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 PARP11Q9NR21 331 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 MRPS18AQ9NVS2 196 aaKnown RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 ETAA1Q9NY74 926 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 CNOT2Q9NZN8 540 aaKnown RBP4.51□□□□□ -1.69
GYPB-204ENST00000504951 SLC23A1Q9UHI7 598 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 CLEC2DQ9UHP7 191 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 TRAPPC2LQ9UL33 140 aa4.51□□□□□ -1.69
GYPB-204ENST00000504951 DYNC1H1Q14204 4646 aaKnown RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 PKD1P98161 4303 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 SAA2-SAA4A0A096LPE2 208 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 TRBV5-5A0A0J9YX44 114 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 LOC100130705A0A1B0GUX0 176 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 A0A1W2PN81 502 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 UBE2QL1A1L167 161 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 MSGN1A6NI15 193 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 SNTNA6NMZ2 147 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 OR11H12B2RN74 326 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 MCRIP1C9JLW8 97 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 UBE2CO00762 179 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 SPINT2O43291 252 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 SC5DO75845 299 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 IGHV3-11P01762 117 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 CD2P06729 351 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 SAA2P0DJI9 122 aaPredicted RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 GTF2F2P13984 249 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 AADACP22760 399 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 CHRNA7P36544 502 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 PPP3R1P63098 170 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 CX3CL1P78423 397 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 MRPL28Q13084 256 aaKnown RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 RIPK1Q13546 671 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 ECSCRQ19T08 205 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 LRRC36Q1X8D7 754 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 CCDC58Q4VC31 144 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 ACTBL2Q562R1 376 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 FAM71F2Q6NXP2 309 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 ZNF343Q6P1L6 599 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 GLIPR1L1Q6UWM5 242 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 GLDNQ6ZMI3 551 aaPredicted RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 ZNF833PQ6ZTB9 187 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 ZNF554Q86TJ5 538 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 LINC00596Q86U02 117 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 MRPL30Q8TCC3 161 aaKnown RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 GHSRQ92847 366 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 CPNE2Q96FN4 548 aaPredicted RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 MRPL48Q96GC5 212 aaKnown RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 PGLYRP3Q96LB9 341 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 ZNF251Q9BRH9 671 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 FAM103A1Q9BTL3 118 aaKnown RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 RSRP1Q9BUV0 290 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 PARP12Q9H0J9 701 aaKnown RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 IFI27L2Q9H2X8 130 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 FGF20Q9NP95 211 aaPredicted RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 TECRQ9NZ01 308 aaKnown RBP4.5□□□□□ -1.69
GYPB-204ENST00000504951 PEMTQ9UBM1 199 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 GAB2Q9UQC2 676 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 ORC6Q9Y5N6 252 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 PEX16Q9Y5Y5 336 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 A3GALT2U3KPV4 340 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 HSPG2P98160 4391 aa4.5□□□□□ -1.69
GYPB-204ENST00000504951 TRBV5-7A0A0A0MS05 114 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 IZUMO1RA6ND01 250 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 ZNF780AO75290 641 aaPredicted RBP4.49□□□□□ -1.69
GYPB-204ENST00000504951 PROP1O75360 226 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 GPX5O75715 221 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 RBBP9O75884 186 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 BAG2O95816 211 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 MAS1P04201 325 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 CT45A6P0DMU7 189 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 CT45A5P0DMU8 189 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 CT45A7P0DMV0 189 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 MGMTP16455 207 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 KIR2DS2P43631 304 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 LINC00205P59089 165 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 CD81P60033 236 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 ZNF45Q02386 682 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 DEFB114Q30KQ6 69 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 RPL39P5Q59GN2 51 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 FAM209BQ5JX69 171 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 C6orf141Q5SZD1 244 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 C6orf183Q5T699 404 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 DMKNQ6E0U4 476 aaPredicted RBP4.49□□□□□ -1.69
GYPB-204ENST00000504951 AWAT2Q6E213 333 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 OR10K2Q6IF99 312 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 FAM131AQ6UXB0 335 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 LYG2Q86SG7 212 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 STX19Q8N4C7 294 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 JAGN1Q8N5M9 183 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms