RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 C17orf98A8MV24 154 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 TMEM178BH3BS89 294 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 PROP1O75360 226 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 P0C879 139 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 SFTPCP11686 197 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 CDSNQ15517 529 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 Q3ZCU0 254 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 ZNF295-AS1Q8N0V1 137 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 OR1S2Q8NGQ3 325 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 TCTEX1D2Q8WW35 142 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 PLA2G2EQ9NZK7 142 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 LPAR3Q9UBY5 353 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 CLN8Q9UBY8 286 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 MMP24Q9Y5R2 645 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 BORCS7-ASMTA0A0B4J1R7 106 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 TRAV38-1A0A0B4J264 116 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 LINC00473A8K010 186 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 WRBO00258 174 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 ITGB1BP1O14713 200 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 PXDC1Q5TGL8 231 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 SPAG16Q8N0X2 631 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 CORO2AQ92828 525 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 GINS3Q9BRX5 216 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 LINC00574Q9H8X3 128 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 COA4Q9NYJ1 87 aa17.67■□□□□ 0.42
UBE2D3-216ENST00000503742 TRGV10A0A0A0MS01 117 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 PLAUP00749 431 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 OMGP23515 440 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 SULT1A2P50226 295 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 ZNF134P52741 427 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 LY6DQ14210 128 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 C1orf87Q8N0U7 546 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 SAT2Q96F10 170 aaPredicted RBP17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 SMIM8Q96KF7 97 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 RAB40CQ96S21 281 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 MS4A5Q9H3V2 200 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 GFOD1Q9NXC2 390 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 CHD8Q9HCK8 2581 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 B9A039 149 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 SIAH2O43255 324 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 GPR12P47775 334 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 OR2B11Q5JQS5 317 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 IFI27L2Q9H2X8 130 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 TMEM106BQ9NUM4 274 aa17.66■□□□□ 0.42
UBE2D3-216ENST00000503742 ARFGEF3Q5TH69 2177 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 PPIAL4EA0A075B759 164 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 NKX6-3A6NJ46 265 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 PPIAL4DF5H284 164 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 FBXO24O75426 580 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 S1PR2O95136 353 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 CLDN14O95500 239 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 PPIAL4FP0DN26 164 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 BAXQ07812 192 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 ZNF816Q0VGE8 651 aaPredicted RBP17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 DYNLRB1Q9NP97 96 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 TAS2R3Q9NYW6 316 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 PPIAL4AQ9Y536 164 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 PIEZO1Q92508 2521 aa17.65■□□□□ 0.42
UBE2D3-216ENST00000503742 ZNF705EA8MWA4 302 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 TNFRSF13BO14836 293 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 DUTP33316 252 aaKnown RBP17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 LINC00205P59089 165 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 UTF1Q5T230 341 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 MARC2Q969Z3 335 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 GAB2Q9UQC2 676 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 PKDREJQ9NTG1 2253 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 ZNF729A6NN14 1252 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 FAM90A26D6RGX4 464 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 TOR1AO14656 332 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 TMPRSS2O15393 492 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 SYNGR2O43760 224 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 SEC11BP0C7V7 166 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 WSB1Q9Y6I7 421 aa17.64■□□□□ 0.41
UBE2D3-216ENST00000503742 KALRNO60229 2985 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 DIDO1Q9BTC0 2240 aaKnown RBP17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 ATG12O94817 140 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 KRASP01116 189 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 SPP1P10451 314 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 CTRB1P17538 263 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 ATF4P18848 351 aaPredicted RBP17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 G6PCP35575 357 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 NCR3LG1Q68D85 454 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 CTRB2Q6GPI1 263 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 CCL17Q92583 94 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 LRRC46Q96FV0 321 aa17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 CISD1Q9NZ45 108 aaKnown RBP17.63■□□□□ 0.41
UBE2D3-216ENST00000503742 RAB19A4D1S5 217 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 TSPAN4O14817 238 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 SLC31A2O15432 143 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 TXNL1O43396 289 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 RPL23AP62750 156 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 BTN1A1Q13410 526 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 MIDNQ504T8 468 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 STPG2Q8N412 459 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 CD300LFQ8TDQ1 290 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 CA5BP1Q8WTZ4 195 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 LAMP3Q9UQV4 416 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 TRIM77I1YAP6 450 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 FCN3O75636 299 aa17.62■□□□□ 0.41
UBE2D3-216ENST00000503742 LOXP28300 417 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms