RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 MYOFQ9NZM1 2061 aa0.41□□□□□ -2.34
SMAD1-203ENST00000502342 DIDO1Q9BTC0 2240 aaKnown RBP0.4□□□□□ -2.35
SMAD1-203ENST00000502342 A0A1W2PQD3 144 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 BHLHE40O14503 412 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 HCRTO43612 131 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 CRYBB3P26998 211 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 TAS2R30P59541 319 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 GNA12Q03113 381 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 SURF2Q15527 256 aaPredicted RBP0.4□□□□□ -2.35
SMAD1-203ENST00000502342 TBC1D28Q2M2D7 210 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 DRAM2Q6UX65 266 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 FP248Q71RG6 208 aaPredicted RBP0.4□□□□□ -2.35
SMAD1-203ENST00000502342 NATD1Q8N6N6 113 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 LRRC20Q8TCA0 184 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 RPS4Y2Q8TD47 263 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 LRRC39Q96DD0 335 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 DOHHQ9BU89 302 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 MED9Q9NWA0 146 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 SNX10Q9Y5X0 201 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 INTS1Q8N201 2190 aaKnown RBP0.4□□□□□ -2.35
SMAD1-203ENST00000502342 AHNAK2Q8IVF2 5795 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 KIAA2026Q5HYC2 2103 aa0.4□□□□□ -2.35
SMAD1-203ENST00000502342 PTPRBP23467 1997 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 PCDH15Q96QU1 1955 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 FREM1Q5H8C1 2179 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 CHD2O14647 1828 aaKnown RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 DSCAMO60469 2012 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 IGHV3-64A0A075B6Q5 118 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 PHYHO14832 338 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 GSTZ1O43708 216 aaPredicted RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 KLRC4O43908 158 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 MRPS14O60783 128 aaKnown RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 LDOC1O95751 146 aaPredicted RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 CRYBA1P05813 215 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 CD24P25063 80 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 CDK9P50750 372 aaKnown RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 STC1P52823 247 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 LINC00313P59037 77 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 TNNC1P63316 161 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 RAB31Q13636 194 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 C1DQ13901 141 aaKnown RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 OR10K2Q6IF99 312 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 PLCZ1Q86YW0 608 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 OR2D3Q8NGH3 330 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 OR51T1Q8NGJ9 327 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 OR51H1Q8NH63 302 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 CCDC12Q8WUD4 166 aaPredicted RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 TMEM239Q8WW34 195 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 PPWD1Q96BP3 646 aaKnown RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 CCDC127Q96BQ5 260 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 ODF3Q96PU9 254 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 SLC2A9Q9NRM0 540 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 MS4A12Q9NXJ0 267 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 TAAR3PQ9P1P4 343 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 RBMX2Q9Y388 322 aaKnown RBP0.39□□□□□ -2.35
SMAD1-203ENST00000502342 C22orf24Q9Y442 160 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 BRWD1Q9NSI6 2320 aa0.39□□□□□ -2.35
SMAD1-203ENST00000502342 POLEQ07864 2286 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 NAV1Q8NEY1 1877 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 HMSDA8MTL9 139 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 IGLV3-27P01718 113 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 RPSAP08865 295 aaKnown RBP0.38□□□□□ -2.35
SMAD1-203ENST00000502342 NQO2P16083 231 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 ADORA1P30542 326 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 CCR2P41597 374 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 DAPP51397 102 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 OR10A3P58181 314 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 CTAG1AP78358 180 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 BTN3A2P78410 334 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 LRRC75BQ2VPJ9 315 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 C18orf21Q32NC0 220 aaPredicted RBP0.38□□□□□ -2.35
SMAD1-203ENST00000502342 LGALS9BQ3B8N2 356 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 SCGB1D4Q6XE38 83 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 C7orf65Q6ZTY9 151 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 CLDND2Q8NHS1 167 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 TNFAIP8L1Q8WVP5 186 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 MBD3L1Q8WWY6 194 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 ACY3Q96HD9 319 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 ZNF514Q96K75 400 aaPredicted RBP0.38□□□□□ -2.35
SMAD1-203ENST00000502342 ADAT1Q9BUB4 502 aaKnown RBP0.38□□□□□ -2.35
SMAD1-203ENST00000502342 EIF5A2Q9GZV4 153 aaKnown RBP0.38□□□□□ -2.35
SMAD1-203ENST00000502342 RAB1BQ9H0U4 201 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 MAT2BQ9NZL9 334 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 GLS2Q9UI32 602 aa0.38□□□□□ -2.35
SMAD1-203ENST00000502342 HEATR5BQ9P2D3 2071 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 A0A1B0GX12 115 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 LIN7AO14910 233 aaPredicted RBP0.37□□□□□ -2.35
SMAD1-203ENST00000502342 ARL6IP5O75915 188 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 NDUFB2O95178 105 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 NPYP01303 97 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 HBZP02008 142 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 SERPINA7P05543 415 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 CCDC172P0C7W6 258 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 HSPA9P38646 679 aaKnown RBP0.37□□□□□ -2.35
SMAD1-203ENST00000502342 CD79BP40259 229 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 CA7P43166 264 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 XIAPP98170 497 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 EMX1Q04741 257 aaPredicted RBP0.37□□□□□ -2.35
SMAD1-203ENST00000502342 SLC36A1Q7Z2H8 476 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 BAP18Q8IXM2 172 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms