RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TMEM252Q8N6L7 170 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR4E2Q8NGC2 313 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR1P1Q8NH06 330 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 SRSF12Q8WXF0 261 aaKnown RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 RDH5Q92781 318 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 SMIM12Q96EX1 92 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 SLC45A3Q96JT2 553 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 FCRL1Q96LA6 429 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR2M4Q96R27 311 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 CGREF1Q99674 301 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF184Q99676 751 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 PITX2Q99697 317 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 C6orf62Q9GZU0 229 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF430Q9H8G1 570 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ISG20L2Q9H9L3 353 aaKnown RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF556Q9HAH1 456 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 RBFOX1Q9NWB1 397 aaKnown RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 CALML5Q9NZT1 146 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF629Q9UEG4 869 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 TRAPPC4Q9Y296 219 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 MYO18BQ8IUG5 2567 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 GOLGA4Q13439 2230 aaKnown RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 UBR5O95071 2799 aaPredicted RBP3.28□□□□□ -1.89
HMGB1P21-201ENST00000502313 SPTA1P02549 2419 aa3.28□□□□□ -1.89
HMGB1P21-201ENST00000502313 SETXQ7Z333 2677 aaKnown RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 ASH1LQ9NR48 2969 aaKnown RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PRRC2CQ9Y520 2896 aaKnown RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PLXNA2O75051 1894 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 TRAV8-6A0A0B4J262 113 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 SPTY2D1-AS1A0A0U1RR47 76 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PRORSD1PA6NEY8 169 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 G3V2T6 193 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 TMX2-CTNND1H3BSU7 103 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 BMPR1BO00238 502 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 NDUFS5O43920 106 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 CPSF4O95639 269 aaKnown RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 IFNA21P01568 189 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 REG1AP05451 166 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 GUSBP08236 651 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 MMP7P09237 267 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 ICAM2P13598 275 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 GNB3P16520 340 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 GPX2P18283 190 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 CXCL3P19876 107 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PSMB9P28065 219 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 IMPA1P29218 277 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 NCBP2P52298 156 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 DIO3P55073 304 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 TAS2R43P59537 309 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 HBG1P69891 147 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 HBG2P69892 147 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PSPHP78330 225 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PRR3P79522 188 aaKnown RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 IFITM2Q01629 132 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 KIAA0040Q15053 153 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PON3Q15166 354 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 RGNQ15493 299 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 CLEC12BQ2HXU8 276 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR2B11Q5JQS5 317 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 FBXW9Q5XUX1 488 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 LAMTOR1Q6IAA8 161 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 SFXN4Q6P4A7 337 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 TNFAIP8L2Q6P589 184 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 SCIMPQ6UWF3 145 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 OLIG3Q7RTU3 272 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 TMEM61Q8N0U2 210 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZCCHC24Q8N2G6 241 aaKnown RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 TMEM86BQ8N661 226 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 ARIH2OSQ8N7S6 290 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 WDSUB1Q8N9V3 476 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 CSNK1G2-AS1Q8NCQ2 148 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF555Q8NEP9 628 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR2Z1Q8NG97 314 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR11H7Q8NGC8 314 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 Q8WTZ3 238 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 RPUSD4Q96CM3 377 aaKnown RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 AURKBQ96GD4 344 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 FMC1Q96HJ9 113 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PYURFQ96I23 114 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 SPACA5Q96QH8 159 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 SMIM14Q96QK8 99 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR2V2Q96R30 315 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 SIGMAR1Q99720 223 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 DDA1Q9BW61 102 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 MROQ9BYG7 248 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR51E2Q9H255 320 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 TPK1Q9H3S4 243 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 VSIRQ9H7M9 311 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF226Q9NYT6 803 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PRO0628Q9UI54 55 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 HHLA2Q9UM44 414 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 ERGIC3Q9Y282 383 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 BTRCQ9Y297 605 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 LRRK2Q5S007 2527 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 SHROOM3Q8TF72 1996 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 CEP192Q8TEP8 1941 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 PLXNB3Q9ULL4 1909 aa3.27□□□□□ -1.89
HMGB1P21-201ENST00000502313 IGHV3OR16-9A0A0B4J2B5 98 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 A0A0J9YXV3 536 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 A0A1B0GXF2 115 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms