RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 C6orf141Q5SZD1 244 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 MEDAGQ5VYS4 303 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 XAF1Q6GPH4 301 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 LYG2Q86SG7 212 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 SNAPC3Q92966 411 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 MUL1Q969V5 352 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 KCTD12Q96CX2 325 aaKnown RBP11.69□□□□□ -0.54
HDAC6-236ENST00000498808 WDR89Q96FK6 387 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-236ENST00000498808 OR14A2Q96R54 314 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 TSNAXQ99598 290 aaKnown RBP11.69□□□□□ -0.54
HDAC6-236ENST00000498808 GGTLC1Q9BX51 225 aa11.69□□□□□ -0.54
HDAC6-236ENST00000498808 ABCA13Q86UQ4 5058 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 FAM90A7PA6NKC0 464 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 FAM90A23PA8MXZ1 464 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 PROP1O75360 226 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 GPX5O75715 221 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 BAG2O95816 211 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 IGFBP3P17936 291 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-236ENST00000498808 LINC00205P59089 165 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 RPS16P62249 146 aaKnown RBP11.68□□□□□ -0.54
HDAC6-236ENST00000498808 PJVKQ0ZLH3 352 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 RIPK1Q13546 671 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 GLIPR1L1Q6UWM5 242 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 WFDC3Q8IUB2 231 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 DRAXINQ8NBI3 349 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-236ENST00000498808 USMG5Q96IX5 58 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 Q96M66 194 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 MYCBPQ99417 103 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-236ENST00000498808 AGMATQ9BSE5 352 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 SELENOIQ9C0D9 397 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 STEAP1Q9UHE8 339 aa11.68□□□□□ -0.54
HDAC6-236ENST00000498808 A0A0B4J203 849 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 NDUFB8O95169 186 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 MGMTP16455 207 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 CPEP16870 476 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 FASP25445 335 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 KIR2DS2P43631 304 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 GYS2P54840 703 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 OR13C5Q8NGS8 318 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 IL1F10Q8WWZ1 152 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 TMEM68Q96MH6 324 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 MUC4Q99102 2169 aa11.67□□□□□ -0.54
HDAC6-236ENST00000498808 TRAV8-7A0A075B6U6 113 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-236ENST00000498808 MSGN1A6NI15 193 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 C2orf70A6NJV1 201 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 PDCD6O75340 191 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 LGALS7P47929 136 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 PRR20EP86478 221 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 PRR20CP86479 221 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 PRR20DP86480 221 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 PRR20BP86481 221 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 PRR20AP86496 221 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 SLC16A13Q7RTY0 426 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 ZNF383Q8NA42 475 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 OAZ3Q9UMX2 235 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 LRRC42Q9Y546 428 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 SELENOKQ9Y6D0 94 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 PKHD1P08F94 4074 aa11.66□□□□□ -0.54
HDAC6-236ENST00000498808 FAT2Q9NYQ8 4349 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 IGLV2-23P01705 113 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 CRYGBP07316 175 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 APELAP0DMC3 54 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 FOLR2P14207 255 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 ATF4P18848 351 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-236ENST00000498808 AWAT2Q6E213 333 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 JAGN1Q8N5M9 183 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 AMBNQ9NP70 447 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 ABRACLQ9P1F3 81 aa11.65□□□□□ -0.54
HDAC6-236ENST00000498808 ZNF230Q9UIE0 474 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-236ENST00000498808 SNTNA6NMZ2 147 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 ITGB1BP1O14713 200 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 GYG2O15488 501 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 CRTAPO75718 401 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-236ENST00000498808 GABRB1P18505 474 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 EXOSC2Q13868 293 aaKnown RBP11.64□□□□□ -0.55
HDAC6-236ENST00000498808 DNAL1Q4LDG9 190 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 RPL22L1Q6P5R6 122 aaKnown RBP11.64□□□□□ -0.55
HDAC6-236ENST00000498808 PDPNQ86YL7 162 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 SVOPQ8N4V2 548 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 ADAD2Q8NCV1 583 aaKnown RBP11.64□□□□□ -0.55
HDAC6-236ENST00000498808 KCNG3Q8TAE7 436 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 PHLDA1Q8WV24 401 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-236ENST00000498808 SULT4A1Q9BR01 284 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 AKIP1Q9NQ31 210 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 TECRQ9NZ01 308 aaKnown RBP11.64□□□□□ -0.55
HDAC6-236ENST00000498808 TP53TG1Q9Y2A0 90 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 DNAH2Q9P225 4427 aa11.64□□□□□ -0.55
HDAC6-236ENST00000498808 DYNC1H1Q14204 4646 aaKnown RBP11.64□□□□□ -0.55
HDAC6-236ENST00000498808 TRBV5-5A0A0J9YX44 114 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 LIMS3P0CW19 117 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 LIMS4P0CW20 117 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 BMI1P35226 326 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 CCDC58Q4VC31 144 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 OR52I1Q8NGK6 324 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 CACNG8Q8WXS5 425 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms