RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 NOTCH1P46531 2555 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 EPPK1P58107 5090 aaKnown RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PPIAL4EA0A075B759 164 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 TRBV6-7A0A0A0MS04 114 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 TEX13DA0A0J9YY54 714 aaPredicted RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 C9orf170A2RU37 121 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 NKX6-3A6NJ46 265 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 CGB1A6NKQ9 187 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PPIAL4DF5H284 164 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 I3L521 148 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 LGALS8O00214 317 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 GOSR2O14653 212 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 HSPA12AO43301 675 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 NDUFA2O43678 99 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 GOSR1O95249 250 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 SFT2D2O95562 160 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 DUS4LO95620 317 aaKnown RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 CYB5R3P00387 301 aaPredicted RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PLAUP00749 431 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PPYP01298 95 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 GIPP09681 153 aaPredicted RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 SCTP09683 121 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PPIAL4FP0DN26 164 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 EGR1P18146 543 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 ZP3P21754 424 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 IL2RGP31785 369 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 CEBPDP49716 269 aaPredicted RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 FXYD4P59646 89 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 RAP2BP61225 183 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PAX5Q02548 391 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 AESQ08117 197 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PPP1R1AQ13522 171 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 SNTB1Q13884 538 aaKnown RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 ATXN7L3Q14CW9 347 aaPredicted RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 HMGN3Q15651 99 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 AANATQ16613 207 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 IGSF11Q5DX21 431 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 KRBOX4Q5JUW0 171 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 TEX36Q5VZQ5 186 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF660Q6AZW8 331 aaPredicted RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 C17orf107Q6ZR85 190 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 CMTM1Q8IZ96 169 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 CD177Q8N6Q3 437 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 ADAD2Q8NCV1 583 aaKnown RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 OR11H7Q8NGC8 314 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PLPPR1Q8TBJ4 325 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 MITD1Q8WV92 249 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 NEUROG1Q92886 237 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 RBPMSQ93062 196 aaKnown RBP4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 MRGPRFQ96AM1 343 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 GALMQ96C23 342 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 SDSLQ96GA7 329 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 CYYR1Q96J86 154 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 CABLES2Q9BTV7 478 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 RAB1BQ9H0U4 201 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 FAM234AQ9H0X4 552 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 DNTTIP1Q9H147 329 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 C5orf66Q9H5L9 145 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 HEXA-AS1Q9H8Q6 139 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 TAF9BQ9HBM6 251 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 ZC4H2Q9NQZ6 224 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 OR2W1Q9Y3N9 320 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 PPIAL4AQ9Y536 164 aa4.39□□□□□ -1.71
HMGXB4-208ENST00000498325 IGKV1D-17A0A075B6S4 117 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 IGHV3OR15-7A0A075B7D8 119 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 IGHV1-69-2A0A0G2JMI3 117 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RPS10-NUDT3A0A1W2PQS6 291 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CRYM-AS1A6NIL9 109 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 DEFB108AA8MXU0 73 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 NPIPB11E5RHQ5 1161 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM178BH3BS89 294 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 K7N7A8 449 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 GPR31O00270 319 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 SPINT2O43291 252 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 TSC22D2O75157 780 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 PROP1O75360 226 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF737O75373 536 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 TUSC2O75896 110 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RGS11O94810 467 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 OR2A4O95047 310 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 IFNA2P01563 188 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 IFNA21P01568 189 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 HLA-GP17693 338 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RCC1P18754 421 aaPredicted RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CXCL3P19876 107 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 AADACP22760 399 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 NFYAP23511 347 aaPredicted RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 LOXP28300 417 aaPredicted RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CD80P33681 288 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CEACAM6P40199 344 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 OR3A1P47881 315 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 PPOXP50336 477 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 LUMP51884 338 aaPredicted RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 PIGPP57054 158 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 RND3P61587 244 aa4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 CYCSP99999 105 aaKnown RBP4.38□□□□□ -1.71
HMGXB4-208ENST00000498325 SRSF2Q01130 221 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms