RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 C9JAW5 83 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SMLR1H3BR10 107 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ARPC5O15511 151 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 NMT2O60551 498 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SPINK4O60575 86 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 DNAH10OSP0CZ25 163 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 IL1RNP18510 177 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RYKP34925 604 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CRYBB1P53674 252 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 FGF8P55075 233 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 ACTR3P61158 418 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 HPCAP84074 193 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 STX5Q13190 355 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 MAPRE2Q15555 327 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TBC1D28Q2M2D7 210 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SLC25A52Q3SY17 297 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 AVPI1Q5T686 147 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 DGAT2L6Q6ZPD8 337 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SLC22A16Q86VW1 577 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 FAM185AQ8N0U4 392 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 BCORP1Q8N888 145 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR4F6Q8NGB9 312 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR5AN1Q8NGI8 311 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR10R2Q8NGX6 335 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RLN3Q8WXF3 142 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PACRGQ96M98 296 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 ZNF488Q96MN9 340 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PYM1Q9BRP8 204 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 VN1R3Q9BXE9 311 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PCBD2Q9H0N5 130 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 LHX5Q9H2C1 402 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ACKR4Q9NPB9 350 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SLC35C2Q9NQQ7 365 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TP53TG3Q9ULZ0 132 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ITIH6Q6UXX5 1313 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 NCOA6Q14686 2063 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 HERC2O95714 4834 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 IGLV8-61A0A075B6I0 122 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TRBV11-1A0A0K0K1C0 115 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 C2orf78A6NCI8 922 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 J3QRK9 145 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ARNTLO00327 626 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 IGLV3-19P01714 112 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 HBZP02008 142 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 EGR2P11161 476 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 FGF3P11487 239 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 GABRR2P28476 465 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OPRM1P35372 400 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CDKN2CP42773 168 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 HSPA7P48741 367 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 GSCP56915 257 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 SNAP25P60880 206 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TAF1AQ15573 450 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 BCL2L15Q5TBC7 163 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 KDM4DQ6B0I6 523 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TMED8Q6PL24 325 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 SLC25A26Q70HW3 274 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RTL10Q7L3V2 364 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PIANPQ8IYJ0 282 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TMEM86AQ8N2M4 240 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 EIF4E3Q8N5X7 224 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 Q8N9L7 120 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 C1orf64Q8NEQ6 169 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR9I1Q8NGQ6 314 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PAQR8Q8TEZ7 354 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SLC7A6Q92536 515 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 GTF3AQ92664 365 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 RITA1Q96K30 269 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 POM121L2Q96KW2 1035 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ZNF681Q96N22 645 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OVOL2Q9BRP0 275 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SLC50A1Q9BRV3 221 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PBOV1Q9GZY1 135 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PPA2Q9H2U2 334 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RGCCQ9H4X1 137 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 HMG20AQ9NP66 347 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 FKBP11Q9NYL4 201 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TAC3Q9UHF0 121 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 AK3Q9UIJ7 227 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OSGIN1Q9UJX0 560 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 FBXL3Q9UKT7 428 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 GPR52Q9Y2T5 361 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TIMM10BQ9Y5J6 103 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 SCN3AQ9NY46 2000 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 IGHV1OR21-1A0A087WYE8 117 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 IRGMA1A4Y4 181 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR2M5A3KFT3 312 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 UBE2CO00762 179 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 INSIG1O15503 277 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 LATO43561 262 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 EDF1O60869 148 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 CD55P08174 381 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CXCL5P42830 114 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CRYBB2P43320 205 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 GPR6P46095 362 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 DLX5P56178 289 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 MAZP56270 477 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 CRADDP78560 199 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 C2orf80Q0P641 193 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CBX3Q13185 183 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms