RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 C7orf50Q9BRJ6 194 aaKnown RBP10.97□□□□□ -0.65
CPNE1-227ENST00000498056 SDHAF2Q9NX18 166 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 SLC2A8Q9NY64 477 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 TNFSF12O43508 249 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 GAPDHP04406 335 aaKnown RBP10.96□□□□□ -0.65
CPNE1-227ENST00000498056 CCR6P51684 374 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF816Q0VGE8 651 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-227ENST00000498056 PHLDA2Q53GA4 152 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 MOB3BQ86TA1 216 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 SLC38A6Q8IZM9 456 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 DRAXINQ8NBI3 349 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-227ENST00000498056 OR13C8Q8NGS7 320 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 TERB2Q8NHR7 220 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 ST6GALNAC6Q969X2 333 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 MALSU1Q96EH3 234 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 AJUBAQ96IF1 538 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 GHITMQ9H3K2 345 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 OCEL1Q9H607 264 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 TBC1D24Q9ULP9 559 aa10.96□□□□□ -0.65
CPNE1-227ENST00000498056 IGHV3-72A0A0B4J1Y9 119 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 IGHV1-3A0A0C4DH29 117 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 LY6LH3BQJ8 138 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 TIMM23O14925 209 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 PLA2G10O15496 165 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 CRLF1O75462 422 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 SLC22A5O76082 557 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 RLN1P04808 185 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 PI3P19957 117 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 BTCP35070 178 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 ECI1P42126 302 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 DEFA1P59665 94 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 DEFA3P59666 94 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 IFITM3Q01628 133 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 LRRC75BQ2VPJ9 315 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 ABCA11PQ4W5N1 156 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 OR2B11Q5JQS5 317 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 MZT2BQ6NZ67 158 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-227ENST00000498056 KCTD9Q7L273 389 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 OR8H3Q8N146 312 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 SIGLECL1Q8N7X8 197 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 TCTEX1D2Q8WW35 142 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 ZNF48Q96MX3 618 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-227ENST00000498056 GPHA2Q96T91 129 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 ZNF251Q9BRH9 671 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 C14orf166Q9Y224 244 aaKnown RBP10.95□□□□□ -0.66
CPNE1-227ENST00000498056 ZFHX3Q15911 3703 aa10.95□□□□□ -0.66
CPNE1-227ENST00000498056 BTBD17A6NE02 478 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 H3BUX3 64 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 GPR31O00270 319 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 IGLV2-14P01704 120 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 APOA2P02652 100 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 FAM157CP0CG43 387 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 S100GP29377 79 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 CATR1Q13166 79 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 ASAH1Q13510 395 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 RBMS2Q15434 407 aaKnown RBP10.94□□□□□ -0.66
CPNE1-227ENST00000498056 LPCAT3Q6P1A2 487 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 RBMS3Q6XE24 437 aaKnown RBP10.94□□□□□ -0.66
CPNE1-227ENST00000498056 CMTM1Q8IZ96 169 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 POC5Q8NA72 575 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 OR51H1Q8NH63 302 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 ENKURQ8TC29 256 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 MRGPRFQ96AM1 343 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 NABP2Q9BQ15 211 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 SLC2A9Q9NRM0 540 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 TNFRSF19Q9NS68 423 aa10.94□□□□□ -0.66
CPNE1-227ENST00000498056 H7C2Y5 167 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 IGHV4-59P01825 116 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 CD24P25063 80 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 GNRHRP30968 328 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 BRS3P32247 399 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 THBS3P49746 956 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 UCP3P55916 312 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 HES1Q14469 280 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 MSMO1Q15800 293 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 TMED4Q7Z7H5 227 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 ZNF418Q8TF45 676 aaPredicted RBP10.93□□□□□ -0.66
CPNE1-227ENST00000498056 CFHR4Q92496 578 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 AKR1E2Q96JD6 320 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 SSX3Q99909 188 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 RSRP1Q9BUV0 290 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 DPAGT1Q9H3H5 408 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 COPZ2Q9P299 210 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 VSIG4Q9Y279 399 aa10.93□□□□□ -0.66
CPNE1-227ENST00000498056 LINC00473A8K010 186 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 HOXA3O43365 443 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 PROP1O75360 226 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 IGKV1D-33P01593 117 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 IGKV1-33P01594 117 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 CTSDP07339 412 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 SNRNP70P08621 437 aaKnown RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 CT45A6P0DMU7 189 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 CT45A5P0DMU8 189 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 CT45A7P0DMV0 189 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms