RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
VIM-208ENST00000497849 ZNF581Q9P0T4 197 aa12.56□□□□□ -0.4
VIM-208ENST00000497849 ARL6IP5O75915 188 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 CDRT1O95170 752 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 BRI3O95415 125 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 GZMHP20718 246 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 KCNJ3P48549 501 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 ZNF134P52741 427 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 OR10A3P58181 314 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 LSAMPQ13449 338 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 ZNF439Q8NDP4 499 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 ARL11Q969Q4 196 aa12.55□□□□□ -0.4
VIM-208ENST00000497849 MYL9P24844 172 aa12.54□□□□□ -0.4
VIM-208ENST00000497849 ACTBP60709 375 aa12.54□□□□□ -0.4
VIM-208ENST00000497849 IL13RA2Q14627 380 aa12.54□□□□□ -0.4
VIM-208ENST00000497849 VPS13DQ5THJ4 4388 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 RGS11O94810 467 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 ZNF182P17025 639 aaPredicted RBP12.53□□□□□ -0.4
VIM-208ENST00000497849 CRIP2P52943 208 aaPredicted RBP12.53□□□□□ -0.4
VIM-208ENST00000497849 C5orf64Q2M2E5 130 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 Q3ZCU0 254 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 CT45A1Q5HYN5 189 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 SUMF2Q8NBJ7 301 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 CT45A3Q8NHU0 189 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 DYNC2LI1Q8TCX1 351 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 RHOVQ96L33 236 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 DPCDQ9BVM2 203 aaPredicted RBP12.53□□□□□ -0.4
VIM-208ENST00000497849 KCNK15Q9H427 330 aa12.53□□□□□ -0.4
VIM-208ENST00000497849 FOXA2Q9Y261 457 aaPredicted RBP12.53□□□□□ -0.4
VIM-208ENST00000497849 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 A0A1W2PP11 408 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 H0Y980 276 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 ARPC1BO15143 372 aaKnown RBP12.52□□□□□ -0.41
VIM-208ENST00000497849 NBR2O15453 112 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 HTR3BO95264 441 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 SDC2P34741 201 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 CLDN12P56749 244 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 MXD1Q05195 221 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 P2RY14Q15391 338 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 HES5Q5TA89 166 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 GLIPR1L1Q6UWM5 242 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 ASCL4Q6XD76 172 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 GTSCR1Q86UQ5 136 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 NR2C2APQ86WQ0 139 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 GATAD1Q8WUU5 269 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 ST6GALNAC5Q9BVH7 336 aa12.52□□□□□ -0.41
VIM-208ENST00000497849 ORC5O43913 435 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 CD37P11049 281 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 EGR2P11161 476 aaPredicted RBP12.51□□□□□ -0.41
VIM-208ENST00000497849 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
VIM-208ENST00000497849 RSU1Q15404 277 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 SLC22A6Q4U2R8 563 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 C1orf100Q5SVJ3 147 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 OR10K2Q6IF99 312 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 TPRA1Q86W33 373 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 NKAIN3Q8N8D7 197 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 CCDC107Q8WV48 283 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 MS4A10Q96PG2 267 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 ZNF251Q9BRH9 671 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 METTL9Q9H1A3 318 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 PLEKHA3Q9HB20 300 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 CCDC59Q9P031 241 aaKnown RBP12.51□□□□□ -0.41
VIM-208ENST00000497849 NUBP2Q9Y5Y2 271 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 V9GY05 133 aa12.51□□□□□ -0.41
VIM-208ENST00000497849 ABCA13Q86UQ4 5058 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 A0A0B4J203 849 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 TMEM30CPA0ZSE6 113 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 IZUMO1RA6ND01 250 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 PDCD5O14737 125 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 LANCL1O43813 399 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 RAB3BP20337 219 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 SERPINA2P20848 420 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 AWAT2Q6E213 333 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 CDH26Q8IXH8 852 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 TCTEX1D1Q8N7M0 179 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 NPBQ8NG41 125 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 CST11Q9H112 138 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 BANF2Q9H503 90 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 PLGRKTQ9HBL7 147 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 A3GALT2U3KPV4 340 aa12.5□□□□□ -0.41
VIM-208ENST00000497849 NDUFA3O95167 84 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 HTR2CP28335 458 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 RORCP51449 518 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 TPPP2P59282 170 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 KLF5Q13887 457 aaPredicted RBP12.49□□□□□ -0.41
VIM-208ENST00000497849 ZNF660Q6AZW8 331 aaPredicted RBP12.49□□□□□ -0.41
VIM-208ENST00000497849 PYHIN1Q6K0P9 492 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 OR10V1Q8NGI7 309 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 CPNE2Q96FN4 548 aaPredicted RBP12.49□□□□□ -0.41
VIM-208ENST00000497849 CYYR1Q96J86 154 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 S100A13Q99584 98 aa12.49□□□□□ -0.41
VIM-208ENST00000497849 UQCC2Q9BRT2 126 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms