RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 ODAMA1E959 279 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 IGHMP01871 453 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 SOX8P57073 446 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 OR1D5P58170 312 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 NMSQ5H8A3 153 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 MKXQ8IYA7 352 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 SSMEM1Q8WWF3 244 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 HIPK2Q9H2X6 1198 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 TRAPPC2LQ9UL33 140 aa9.06□□□□□ -0.96
TRAPPC12-223ENST00000497597 CEP250Q9BV73 2442 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 A0A096LPE4 126 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 A0A1W2PPZ6 126 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 PRR19A6NJB7 356 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 A8MXE2 369 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 HSBP1O75506 76 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 NDUFB8O95169 186 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 GOSR1O95249 250 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 TDGF1P13385 188 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 G6PCP35575 357 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 RBM11P57052 281 aaKnown RBP9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 RPL19P84098 196 aaKnown RBP9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 SERF2P84101 59 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 MBD3L1Q8WWY6 194 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 MRPL13Q9BYD1 178 aaKnown RBP9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 PNRC2Q9NPJ4 139 aaKnown RBP9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 BLACEA4D250 179 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 ZIC3O60481 467 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 PAFAH1B2P68402 229 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 LRRC75BQ2VPJ9 315 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 LHFPL2Q6ZUX7 228 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 SFRP2Q96HF1 295 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 DEFB126Q9BYW3 111 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 SLC35D1Q9NTN3 355 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 NKX6-3A6NJ46 265 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 UCP1P25874 307 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 SRIP30626 198 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 CAPZBP47756 277 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 HES3Q5TGS1 186 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 RNASEKQ6P5S7 137 aaKnown RBP9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 LINC01551Q86U37 167 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 ZDHHC16Q969W1 377 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
TRAPPC12-223ENST00000497597 OBSL1O75147 1896 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 KIR2DS1A0A191URI9 304 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 SCO2A0A1W2PP80 73 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 TMEM250H0YL14 139 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 RBFOX2O43251 390 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 SNAI2O43623 268 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 PSG1P11464 419 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 KIR2DS4P43632 304 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 LHX2P50458 406 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 ZP4Q12836 540 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 KIR2DS1Q14954 304 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 HAPLN4Q86UW8 402 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 KLHDC1Q8N7A1 406 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 APOBEC3DQ96AK3 386 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 CLDN23Q96B33 292 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 TMEM56Q96MV1 263 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 TECRQ9NZ01 308 aaKnown RBP9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 TMEM56-RWDD3S4R434 201 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 CHD9Q3L8U1 2897 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 DPRXA6NFQ7 191 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 HYPMO75409 117 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 IGHV3-13P01766 116 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 IGHV3-7P01780 117 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 APOA2P02652 100 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 GNB1P62873 340 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 KRTCAP3Q53RY4 240 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 STUMQ69YW2 141 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 OR1L3Q8NH93 324 aa9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 BCL2L2Q92843 193 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC12-223ENST00000497597 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 A0A1W2PQD3 144 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 FOXI3A8MTJ6 420 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 ETV2O00321 342 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 SELENOTP62341 195 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 PRR27Q6MZM9 219 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 WFDC8Q8IUA0 241 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 RNF2Q99496 336 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 NAA38Q9BRA0 125 aaKnown RBP9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 PYGO2Q9BRQ0 406 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 LRRC61Q9BV99 259 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 GNB4Q9HAV0 340 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 FGF21Q9NSA1 209 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 ATP23Q9Y6H3 246 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 A0A1W2PQF6 199 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 CRYABP02511 175 aaKnown RBP9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 CA6P23280 308 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 TMEM211Q6ICI0 200 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 MRPL21Q7Z2W9 205 aaKnown RBP9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 NHLRC2Q8NBF2 726 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 OR5P3Q8WZ94 311 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 DEPPQ9NTK1 212 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 ELOVL5Q9NYP7 299 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 TNFSF11O14788 317 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 ZG16O60844 167 aa9.03□□□□□ -0.96
TRAPPC12-223ENST00000497597 NPPCP23582 126 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms