RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 AKR1E2Q96JD6 320 aa17.66■□□□□ 0.42
ECHDC3-205ENST00000496136 SCGB3A2Q96PL1 93 aa17.66■□□□□ 0.42
ECHDC3-205ENST00000496136 RTBDNQ9BSG5 229 aaPredicted RBP17.66■□□□□ 0.42
ECHDC3-205ENST00000496136 C5orf66Q9H5L9 145 aa17.66■□□□□ 0.42
ECHDC3-205ENST00000496136 COPZ2Q9P299 210 aa17.66■□□□□ 0.42
ECHDC3-205ENST00000496136 TBL2Q9Y4P3 447 aaKnown RBP17.66■□□□□ 0.42
ECHDC3-205ENST00000496136 MINOS1-NBL1R4GNA1 71 aa17.66■□□□□ 0.42
ECHDC3-205ENST00000496136 NAV3Q8IVL0 2385 aa17.65■□□□□ 0.42
ECHDC3-205ENST00000496136 IL3RAP26951 378 aa17.65■□□□□ 0.42
ECHDC3-205ENST00000496136 ZNF833PQ6ZTB9 187 aa17.65■□□□□ 0.42
ECHDC3-205ENST00000496136 ZDHHC22Q8N966 263 aa17.65■□□□□ 0.42
ECHDC3-205ENST00000496136 S1PR3Q99500 378 aa17.65■□□□□ 0.42
ECHDC3-205ENST00000496136 NUP50Q9UKX7 468 aa17.65■□□□□ 0.42
ECHDC3-205ENST00000496136 FLVCR2Q9UPI3 526 aa17.65■□□□□ 0.42
ECHDC3-205ENST00000496136 HIVEP2P31629 2446 aa17.64■□□□□ 0.42
ECHDC3-205ENST00000496136 GPR31O00270 319 aa17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 PTTG1O95997 202 aa17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 CTSDP07339 412 aaPredicted RBP17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 MSMO1Q15800 293 aa17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 RGS21Q2M5E4 152 aa17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 CLEC9AQ6UXN8 241 aa17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 ZBTB34Q8NCN2 500 aa17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 GPHA2Q96T91 129 aa17.64■□□□□ 0.41
ECHDC3-205ENST00000496136 EPHA1P21709 976 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 CEACAM3P40198 252 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 REG1BP48304 166 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 BPIFB3P59826 476 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 PHLDA2Q53GA4 152 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 CMTM1Q8IZ96 169 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 DRAXINQ8NBI3 349 aaPredicted RBP17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 MALSU1Q96EH3 234 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 ZNF486Q96H40 463 aaPredicted RBP17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 GSX1Q9H4S2 264 aaPredicted RBP17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 HILPDAQ9Y5L2 63 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 TNFSF12O43508 249 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 LINC00205P59089 165 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 EIF4EBP1Q13541 118 aaPredicted RBP17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 SSX2Q16385 188 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 TPTE2P1Q5T6R2 138 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 DYNAPQ8N1N2 210 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 RTN4IP1Q8WWV3 396 aaPredicted RBP17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 RPEQ96AT9 228 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 SLC2A9Q9NRM0 540 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 NUDT15Q9NV35 164 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 TMEM160Q9NX00 188 aa17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 C14orf166Q9Y224 244 aaKnown RBP17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 SOX21Q9Y651 276 aaPredicted RBP17.63■□□□□ 0.41
ECHDC3-205ENST00000496136 M0R1X1 148 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 PGLYRP1O75594 196 aaPredicted RBP17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 GAPDHP04406 335 aaKnown RBP17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 RLN1P04808 185 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 SPNP16150 400 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 PAX6P26367 422 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 PIGPP57054 158 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 ABCA11PQ4W5N1 156 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 FAM71F2Q6NXP2 309 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 IL17RELQ6ZVW7 336 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 TEX29Q8N6K0 151 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 ADAD2Q8NCV1 583 aaKnown RBP17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 C20orf85Q9H1P6 137 aa17.62■□□□□ 0.41
ECHDC3-205ENST00000496136 TRAV6A0A075B6T7 132 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 ARPC1BO15143 372 aaKnown RBP17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 CT45A6P0DMU7 189 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 CT45A5P0DMU8 189 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 CT45A7P0DMV0 189 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 TMED4Q7Z7H5 227 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 TGIF2LXQ8IUE1 241 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 NUBP2Q9Y5Y2 271 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 MXRA5Q9NR99 2828 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 A0A0U1RQK1 487 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 DUTP33316 252 aaKnown RBP17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 ZNF816Q0VGE8 651 aaPredicted RBP17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 PLET1Q6UQ28 207 aa17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 CCBE1Q6UXH8 406 aaPredicted RBP17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 MS4A7Q9GZW8 240 aaPredicted RBP17.61■□□□□ 0.41
ECHDC3-205ENST00000496136 LINC00473A8K010 186 aa17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 RND3P61587 244 aa17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 RPL30P62888 115 aaKnown RBP17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 Q71RC1 249 aaPredicted RBP17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 BCL6BQ8N143 479 aaPredicted RBP17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 CENPSQ8N2Z9 138 aa17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 TMEM230Q96A57 120 aa17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 HSD17B10Q99714 261 aaKnown RBP17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 MRPL20Q9BYC9 149 aaKnown RBP17.6■□□□□ 0.41
ECHDC3-205ENST00000496136 IGHV1-3A0A0C4DH29 117 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 MPPED1O15442 326 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 H2AFB2P0C5Z0 115 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 AKR1C4P17516 323 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 OXA1LQ15070 435 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 ZNF66Q6ZN08 573 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 TBC1D26Q86UD7 250 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 C22orf15Q8WYQ4 148 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 MARVELD1Q9BSK0 173 aa17.59■□□□□ 0.41
ECHDC3-205ENST00000496136 OOSP1A8MZH6 123 aa17.58■□□□□ 0.41
ECHDC3-205ENST00000496136 S100GP29377 79 aa17.58■□□□□ 0.41
ECHDC3-205ENST00000496136 GLDNQ6ZMI3 551 aaPredicted RBP17.58■□□□□ 0.41
ECHDC3-205ENST00000496136 C9orf139Q6ZV77 190 aa17.58■□□□□ 0.41
ECHDC3-205ENST00000496136 ZNF383Q8NA42 475 aa17.58■□□□□ 0.41
ECHDC3-205ENST00000496136 NABP2Q9BQ15 211 aa17.58■□□□□ 0.41
ECHDC3-205ENST00000496136 FAM96BQ9Y3D0 163 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms