RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	SULT4A1	Q9BR01	284 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	AGMAT	Q9BSE5	352 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	FAAP24	Q9BTP7	215 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	C9orf16	Q9BUW7	83 aa		13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	DIMT1	Q9UNQ2	313 aa	Known RBP	13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.37	□□□□□ -0.27
TMEM53-209	ENST00000495630	ANKRD34B	A5PLL1	514 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	SPDEF	O95238	335 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	BRI3	O95415	125 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	SYNJ2BP	P57105	145 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630		Q8N402	240 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	OR5T1	Q8NG75	326 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	ABHD14B	Q96IU4	210 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	HIPK2	Q9H2X6	1198 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	CLEC2D	Q9UHP7	191 aa		13.36	□□□□□ -0.27
TMEM53-209	ENST00000495630	CSN3	P07498	182 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	CPE	P16870	476 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	AADAC	P22760	399 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	RPS16	P62249	146 aa	Known RBP	13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	MED21	Q13503	144 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	ZNF880	Q6PDB4	577 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	NKAIN3	Q8N8D7	197 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	ZNF485	Q8NCK3	441 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	FAM46B	Q96A09	425 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	TMEM68	Q96MH6	324 aa		13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	PEF1	Q9UBV8	284 aa	Known RBP	13.35	□□□□□ -0.27
TMEM53-209	ENST00000495630	SHISA3	A0PJX4	238 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	PROP1	O75360	226 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	NAPSA	O96009	420 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	UBB	P0CG47	229 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	MECP2	P51608	486 aa	Known RBP	13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	ZNF343	Q6P1L6	599 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	SVOP	Q8N4V2	548 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	ZFP41	Q8N8Y5	198 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	GRPEL2	Q8TAA5	225 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	EDARADD	Q8WWZ3	215 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	DERL3	Q96Q80	235 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	PARP12	Q9H0J9	701 aa	Known RBP	13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	CEPT1	Q9Y6K0	416 aa		13.34	□□□□□ -0.27
TMEM53-209	ENST00000495630	CNIH1	O95406	144 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	IGKV1-16	P04430	117 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	SNRPB	P14678	240 aa	Known RBP	13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	ZBTB25	P24278	435 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	CEACAM6	P40199	344 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	C6orf201	Q7Z4U5	140 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	C10orf67	Q8IYJ2	551 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	OR2K2	Q8NGT1	345 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	PTX4	Q96A99	478 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	TMEM80	Q96HE8	168 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	USMG5	Q96IX5	58 aa		13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	RIMS4	Q9H426	269 aa	Predicted RBP	13.33	□□□□□ -0.28
TMEM53-209	ENST00000495630	HYDIN	Q4G0P3	5121 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	CD1A	P06126	327 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	TAS2R43	P59537	309 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	RPS27A	P62979	156 aa	Known RBP	13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	MOB1B	Q7L9L4	216 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	PDPN	Q86YL7	162 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	ZNF555	Q8NEP9	628 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	THRSP	Q92748	146 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	RETN	Q9HD89	108 aa		13.32	□□□□□ -0.28
TMEM53-209	ENST00000495630	TRBV6-6	A0A0A6YYG2	114 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	IZUMO1R	A6ND01	250 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	SLC25A17	O43808	307 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	OR2A4	O95047	310 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	HTR2C	P28335	458 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	LGALS7	P47929	136 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	RPEL1	Q2QD12	228 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	ZNF383	Q8NA42	475 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	SETD6	Q8TBK2	473 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	TM2D1	Q9BX74	207 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	PLEKHJ1	Q9NW61	149 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	PEMT	Q9UBM1	199 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	ZNF221	Q9UK13	617 aa		13.31	□□□□□ -0.28
TMEM53-209	ENST00000495630	AIRE	O43918	545 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	TPPP	O94811	219 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	APOA2	P02652	100 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	MAPK3	P27361	379 aa	Predicted RBP	13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	LINC00205	P59089	165 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	SSBP2	P81877	361 aa	Predicted RBP	13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	OR10K2	Q6IF99	312 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	LAX1	Q8IWV1	398 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	BVES	Q8NE79	360 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	KCNG3	Q8TAE7	436 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	SNAPC3	Q92966	411 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	TMEM59	Q9BXS4	323 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	MGAT4A	Q9UM21	535 aa		13.3	□□□□□ -0.28
TMEM53-209	ENST00000495630	PNMA8C	A0A1B0GUJ8	204 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	DYNC1I1	O14576	645 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	CRYGB	P07316	175 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	CEL	P19835	753 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	PJVK	Q0ZLH3	352 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	C1orf100	Q5SVJ3	147 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	FAM110A	Q9BQ89	295 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	NEURL2	Q9BR09	285 aa		13.29	□□□□□ -0.28
TMEM53-209	ENST00000495630	KRTAP17-1	Q9BYP8	105 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms