RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	OXLD1	Q5BKU9	147 aa		10.47	□□□□□ -0.73
RBM28-208	ENST00000495327	LGALS14	Q8TCE9	139 aa		10.47	□□□□□ -0.73
RBM28-208	ENST00000495327	RITA1	Q96K30	269 aa		10.47	□□□□□ -0.73
RBM28-208	ENST00000495327	ATG5	Q9H1Y0	275 aa		10.47	□□□□□ -0.73
RBM28-208	ENST00000495327	DAPK2	Q9UIK4	370 aa		10.47	□□□□□ -0.73
RBM28-208	ENST00000495327	ZNF221	Q9UK13	617 aa		10.47	□□□□□ -0.73
RBM28-208	ENST00000495327	WASHC3	Q9Y3C0	194 aa		10.47	□□□□□ -0.73
RBM28-208	ENST00000495327		A0A075B6Q4	140 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	IGHV7-81	A0A0B4J1V7	117 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	PROP1	O75360	226 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	IGHG4	P01861	327 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	SDC2	P34741	201 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	THBS3	P49746	956 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	ARFRP1	Q13795	201 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	IGSF11	Q5DX21	431 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	REC114	Q7Z4M0	266 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	LINC00482	Q8N8I6	264 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	KLHL30-AS1	Q8NEE0	82 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	OR10J5	Q8NHC4	309 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	RCC1L	Q96I51	464 aa	Known RBP	10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	RNF5	Q99942	180 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	ETV7	Q9Y603	341 aa		10.46	□□□□□ -0.73
RBM28-208	ENST00000495327	LOC100506127	A0A0U1RQW1	187 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	RRH	O14718	337 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	BET1	O15155	118 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	ATP6V0E1	O15342	81 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	TMEM127	O75204	238 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	SPDEF	O95238	335 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	TNFAIP8	O95379	198 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	DUS4L	O95620	317 aa	Known RBP	10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	RPLP1	P05386	114 aa	Known RBP	10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	TFAP2A	P05549	437 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	GSTP1	P09211	210 aa	Known RBP	10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	GSTT2	P0CG29	244 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	GSTT2B	P0CG30	244 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	SNRPB	P14678	240 aa	Known RBP	10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	PSMB8	P28062	276 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	TALDO1	P37837	337 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	CRIP2	P52943	208 aa	Predicted RBP	10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	TIMM50	Q3ZCQ8	353 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	C8orf86	Q6ZUL3	223 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	PDPN	Q86YL7	162 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	ZNF695	Q8IW36	515 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	MAFIP	Q8WZ33	124 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	OR2D2	Q9H210	308 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	OR51J1	Q9H342	316 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	RNF167	Q9H6Y7	350 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	RHBDL2	Q9NX52	303 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.45	□□□□□ -0.74
RBM28-208	ENST00000495327	GAB2	Q9UQC2	676 aa		10.45	□□□□□ -0.74
RBM28-208	ENST00000495327		A0A087WXM4	84 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	NUDT19	A8MXV4	375 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327		H7C2Y5	167 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	APOA2	P02652	100 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	IGLL1	P15814	213 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	PPIF	P30405	207 aa	Known RBP	10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	MYCNOS	P40205	109 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	CDX1	P47902	265 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	PITPNA	Q00169	270 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	MXD1	Q05195	221 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	CDNF	Q49AH0	187 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	HACD4	Q5VWC8	232 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	LIN54	Q6MZP7	749 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	C18orf65	Q6ZTR6	163 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	MRPL41	Q8IXM3	137 aa	Known RBP	10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	ZNF383	Q8NA42	475 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	MYOZ3	Q8TDC0	251 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	P2RX4	Q99571	388 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	DCSTAMP	Q9H295	470 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	VCX3A	Q9NNX9	186 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	PARP11	Q9NR21	331 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	NECAP2	Q9NVZ3	263 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	ELF5	Q9UKW6	265 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	RNF150	Q9ULK6	438 aa		10.44	□□□□□ -0.74
RBM28-208	ENST00000495327	IGKV1D-8	A0A087WSZ0	117 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	CLEC2L	P0C7M8	214 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	OR8U9	P0C7N5	309 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	NDP	Q00604	133 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	ZNF260	Q3ZCT1	412 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	C19orf54	Q5BKX5	351 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	TSPAN14	Q8NG11	270 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	OR8U1	Q8NH10	309 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	SLC25A38	Q96DW6	304 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	TSNAX	Q99598	290 aa	Known RBP	10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	GINS4	Q9BRT9	223 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	GPR61	Q9BZJ8	451 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	FBXL15	Q9H469	300 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327	SDHAF2	Q9NX18	166 aa		10.43	□□□□□ -0.74
RBM28-208	ENST00000495327		A0A0A6YYH2	397 aa		10.42	□□□□□ -0.74
RBM28-208	ENST00000495327	TRAV41	A0A0B4J266	112 aa		10.42	□□□□□ -0.74
RBM28-208	ENST00000495327	TMEM235	A6NFC5	223 aa		10.42	□□□□□ -0.74
RBM28-208	ENST00000495327		A6NJ64	397 aa		10.42	□□□□□ -0.74
RBM28-208	ENST00000495327	TRIM64C	A6NLI5	447 aa		10.42	□□□□□ -0.74
RBM28-208	ENST00000495327		M0R1X1	148 aa		10.42	□□□□□ -0.74
RBM28-208	ENST00000495327	IGLV1-40	P01703	118 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms