RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PLGRKTQ9HBL7 147 aa9.02□□□□□ -0.97
VTI1A-208ENST00000494728 ABRACLQ9P1F3 81 aa9.02□□□□□ -0.97
VTI1A-208ENST00000494728 A3GALT2U3KPV4 340 aa9.02□□□□□ -0.97
VTI1A-208ENST00000494728 RYR2Q92736 4967 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 TMEM272A0A1B0GTI8 110 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 A0A1W2PN81 502 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 OR5H14A6NHG9 310 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 RAB29O14966 203 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 RGS10O43665 173 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 CD3GP09693 182 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 CPEP16870 476 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 CALRP27797 417 aaKnown RBP9.01□□□□□ -0.97
VTI1A-208ENST00000494728 CHRNA7P36544 502 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 ECI1P42126 302 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 RAB9AP51151 201 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 CRIP2P52943 208 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-208ENST00000494728 SLURP1P55000 103 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 OR10A3P58181 314 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 CX3CL1P78423 397 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 ZNF616Q08AN1 781 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 MLLT11Q13015 90 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-208ENST00000494728 RAB11BQ15907 218 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 SSX1Q16384 188 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 LIN54Q6MZP7 749 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 ZNF383Q8NA42 475 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 Q9N2K0 584 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 C12orf4Q9NQ89 552 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 SCN3BQ9NY72 215 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 PIPOXQ9P0Z9 390 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 RNF150Q9ULK6 438 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 VSIG4Q9Y279 399 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 KCNK7Q9Y2U2 307 aa9.01□□□□□ -0.97
VTI1A-208ENST00000494728 IGHV4OR15-8A0A075B7B6 117 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 A0A087WW49 117 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 ITGB1BP1O14713 200 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 RAMP3O60896 148 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 CEACAM6P40199 344 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 HES5Q5TA89 166 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 OR1N2Q8NGR9 330 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 DCUN1D4Q92564 292 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 FAM3DQ96BQ1 224 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 CLCC1Q96S66 551 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 ISYNA1Q9NPH2 558 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 KIAA1456Q9P272 454 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 HSF4Q9ULV5 492 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 WASHC3Q9Y3C0 194 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 TPRKBQ9Y3C4 175 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 LRRC42Q9Y546 428 aa9□□□□□ -0.97
VTI1A-208ENST00000494728 A0A0B4J203 849 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 H7C2Y5 167 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 ARPC1BO15143 372 aaKnown RBP8.99□□□□□ -0.97
VTI1A-208ENST00000494728 CA2P00918 260 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 IGHV3-11P01762 117 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 OR8U8P0C7N1 319 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 PSG5Q15238 335 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 TMEM65Q6PI78 240 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 PRSS48Q7RTY5 328 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 NR2C2APQ86WQ0 139 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 DLX4Q92988 240 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-208ENST00000494728 PTX4Q96A99 478 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 MGLLQ99685 303 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 ASCL2Q99929 193 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 CMSS1Q9BQ75 279 aaKnown RBP8.99□□□□□ -0.97
VTI1A-208ENST00000494728 CHCHD6Q9BRQ6 235 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 URM1Q9BTM9 101 aaKnown RBP8.99□□□□□ -0.97
VTI1A-208ENST00000494728 CCDC90BQ9GZT6 254 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 TOLLIPQ9H0E2 274 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 RDH8Q9NYR8 311 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 METTL1Q9UBP6 276 aaKnown RBP8.99□□□□□ -0.97
VTI1A-208ENST00000494728 FOXA2Q9Y261 457 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-208ENST00000494728 ZNF256Q9Y2P7 627 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-208ENST00000494728 NUBP2Q9Y5Y2 271 aa8.99□□□□□ -0.97
VTI1A-208ENST00000494728 HSPA12AO43301 675 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 ARL6IP5O75915 188 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 LGALS1P09382 135 aaKnown RBP8.98□□□□□ -0.97
VTI1A-208ENST00000494728 ZBTB25P24278 435 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 DEFA5Q01523 94 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 PLGLAQ15195 96 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 TBCEQ15813 527 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-208ENST00000494728 C2orf76Q3KRA6 126 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 IGSF11Q5DX21 431 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 ZNF660Q6AZW8 331 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-208ENST00000494728 IZUMO2Q6UXV1 221 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 HAPLN4Q86UW8 402 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 LFNGQ8NES3 379 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 ABHD5Q8WTS1 349 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 EDARADDQ8WWZ3 215 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 WWC2-AS2Q96NR7 200 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 MS4A10Q96PG2 267 aa8.98□□□□□ -0.97
VTI1A-208ENST00000494728 RIMS4Q9H426 269 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-208ENST00000494728 IGKV1D-8A0A087WSZ0 117 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 SMIM30A4D0T7 59 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 TRDCB7Z8K6 153 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 MFNGO00587 321 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 OVOL1O14753 267 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 DENRO43583 198 aaKnown RBP8.97□□□□□ -0.97
VTI1A-208ENST00000494728 SLC25A17O43808 307 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 FCGR3AP08637 254 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms