RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CMSS1Q9BQ75 279 aaKnown RBP10.43□□□□□ -0.74
CTDSP1-212ENST00000494067 C12orf4Q9NQ89 552 aa10.43□□□□□ -0.74
CTDSP1-212ENST00000494067 IGKV1-6A0A0C4DH72 117 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 LY86O95711 162 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 IGLV1-40P01703 118 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 VEGFCP49767 419 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 HLA-DRB3P79483 266 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 RUNX1Q01196 453 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 MLLT11Q13015 90 aaPredicted RBP10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 FHL3Q13643 280 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 SSX1Q16384 188 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 PLAC9Q5JTB6 97 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 ABHD14BQ96IU4 210 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 OR5B12Q96R08 314 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 FBXL15Q9H469 300 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 GNB4Q9HAV0 340 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 Q9N2K0 584 aa10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 FOXA2Q9Y261 457 aaPredicted RBP10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 ZNF256Q9Y2P7 627 aaPredicted RBP10.42□□□□□ -0.74
CTDSP1-212ENST00000494067 H0YJW9 148 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 I3L521 148 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 OVOL1O14753 267 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 LDLRAD4O15165 306 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 APOA2P02652 100 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 SCTP09683 121 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 CT45A6P0DMU7 189 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 CT45A5P0DMU8 189 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 CT45A7P0DMV0 189 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 CPEP16870 476 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 CALRP27797 417 aaKnown RBP10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 SERPINB10P48595 397 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 CX3CL1P78423 397 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 C19orf54Q5BKX5 351 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 ZNF429Q86V71 674 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 MINDY2Q8NBR6 621 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 OR5AN1Q8NGI8 311 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 FAM3DQ96BQ1 224 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 ARHGAP5-AS1Q96IT6 56 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 PRR25Q96S07 402 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 TSNAXQ99598 290 aaKnown RBP10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 AGMATQ9BSE5 352 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 ACOT13Q9NPJ3 140 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 METTL1Q9UBP6 276 aaKnown RBP10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 A3GALT2U3KPV4 340 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 V9GY05 133 aa10.41□□□□□ -0.74
CTDSP1-212ENST00000494067 TRDCB7Z8K6 153 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 LINC01619G3V211 115 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 FCN1O00602 326 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 PDCD5O14737 125 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 DENRO43583 198 aaKnown RBP10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 SOX15O60248 233 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 CD3GP09693 182 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 EGR2P11161 476 aaPredicted RBP10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 GADD45AP24522 165 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 OR10A3P58181 314 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 RPS16P62249 146 aaKnown RBP10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 CBX3Q13185 183 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 C2orf76Q3KRA6 126 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 MOGAT2Q3SYC2 334 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 UNQ5815/PRO19632Q6UWF5 114 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 PRSS48Q7RTY5 328 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 PPP1R27Q86WC6 154 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 CASTOR1Q8WTX7 329 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 PTX4Q96A99 478 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 FLYWCH2Q96CP2 140 aaKnown RBP10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 CLCC1Q96S66 551 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 MGLLQ99685 303 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 CENPOQ9BU64 300 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 PECRQ9BY49 303 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 C11orf54Q9H0W9 315 aaPredicted RBP10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 SCOCQ9UIL1 159 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 RAB22AQ9UL26 194 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 BLOC1S6Q9UL45 172 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 KCNK7Q9Y2U2 307 aa10.4□□□□□ -0.74
CTDSP1-212ENST00000494067 TMEM272A0A1B0GTI8 110 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 ARPC1BO15143 372 aaKnown RBP10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 SAP30O75446 220 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 SPDEFO95238 335 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 TFAP2AP05549 437 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 HSPA13P48723 471 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 CRIP2P52943 208 aaPredicted RBP10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 GNB1P62873 340 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 AKIRIN2Q53H80 203 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 ACTBL2Q562R1 376 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 HES5Q5TA89 166 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 CD200R1LQ6Q8B3 271 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 IZUMO2Q6UXV1 221 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 ZNF562Q6V9R5 426 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 NR2C2APQ86WQ0 139 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 PDPNQ86YL7 162 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 DCUN1D4Q92564 292 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 C5orf30Q96GV9 206 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 ALX4Q9H161 411 aaPredicted RBP10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 SLA2Q9H6Q3 261 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 ZNF355PQ9NSJ1 428 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 GAB2Q9UQC2 676 aa10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 LSM4Q9Y4Z0 139 aaKnown RBP10.39□□□□□ -0.75
CTDSP1-212ENST00000494067 RBM7Q9Y580 266 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms