RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 KIR2DS2P43631 304 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 PRB3Q04118 309 aaPredicted RBP12.1□□□□□ -0.47
ACTB-213ENST00000493945 ASAH1Q13510 395 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 DCTN2Q13561 401 aaKnown RBP12.1□□□□□ -0.47
ACTB-213ENST00000493945 SSX2Q16385 188 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 ZNF660Q6AZW8 331 aaPredicted RBP12.1□□□□□ -0.47
ACTB-213ENST00000493945 ZNF66Q6ZN08 573 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 ZNF833PQ6ZTB9 187 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 ENKURQ8TC29 256 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 CAPSLQ8WWF8 208 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 RTN4IP1Q8WWV3 396 aaPredicted RBP12.1□□□□□ -0.47
ACTB-213ENST00000493945 ABHD14BQ96IU4 210 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 SLC6A7Q99884 636 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 AGMATQ9BSE5 352 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 PITPNC1Q9UKF7 332 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 HILPDAQ9Y5L2 63 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 A0A0U1RQK1 487 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 INAFM1C9JVW0 142 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 M0R1X1 148 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 B3GALNT1O75752 331 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 ZNF134P52741 427 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 TAS2R31P59538 309 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 RTL8BQ17RB0 113 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 FAAP20Q6NZ36 180 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 IL17RELQ6ZVW7 336 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 TCTEX1D1Q8N7M0 179 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 ZDHHC22Q8N966 263 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 OR4D10Q8NGI6 311 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 FXYD6Q9H0Q3 95 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 GSX1Q9H4S2 264 aaPredicted RBP12.09□□□□□ -0.47
ACTB-213ENST00000493945 LIN7CQ9NUP9 197 aaKnown RBP12.09□□□□□ -0.47
ACTB-213ENST00000493945 RNF150Q9ULK6 438 aa12.09□□□□□ -0.47
ACTB-213ENST00000493945 SONP18583 2426 aaKnown RBP12.09□□□□□ -0.47
ACTB-213ENST00000493945 FAM240BA0A1B0GVZ2 78 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 CRLF1O75462 422 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 IFNA2P01563 188 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 DYNLT3P51808 116 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 Q71RC1 249 aaPredicted RBP12.08□□□□□ -0.48
ACTB-213ENST00000493945 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 LHFPL4Q7Z7J7 247 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 LDLRAD3Q86YD5 345 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 BVESQ8NE79 360 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 CD300LFQ8TDQ1 290 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 PARP12Q9H0J9 701 aaKnown RBP12.08□□□□□ -0.48
ACTB-213ENST00000493945 MEGF9Q9H1U4 602 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 RAB18Q9NP72 206 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 SDHAF2Q9NX18 166 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 ZNRD1Q9P1U0 126 aa12.08□□□□□ -0.48
ACTB-213ENST00000493945 IGKV1D-13A0A0B4J2D9 117 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 IGHV1-3A0A0C4DH29 117 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 VGLL3A8MV65 326 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 LY6LH3BQJ8 138 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 CTSDP07339 412 aaPredicted RBP12.07□□□□□ -0.48
ACTB-213ENST00000493945 ZNF735P0CB33 412 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 IGKV1-13P0DP09 117 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 ANXA3P12429 323 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 AADACL3Q5VUY0 350 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 DHRS7BQ6IAN0 325 aaPredicted RBP12.07□□□□□ -0.48
ACTB-213ENST00000493945 LIAT1Q6ZQX7 453 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 PDPNQ86YL7 162 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 TMEM86BQ8N661 226 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 DRAM1Q8N682 238 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 TCTEX1D2Q8WW35 142 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 ST6GALNAC6Q969X2 333 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 RSRP1Q9BUV0 290 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 POMT1Q9Y6A1 747 aa12.07□□□□□ -0.48
ACTB-213ENST00000493945 A0A0A6YYJ9 748 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 H7C2Y5 167 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 CD1BP29016 333 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 REG1BP48304 166 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 RND3P61587 244 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 HES1Q14469 280 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 DEFB112Q30KQ8 113 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 RPL39P5Q59GN2 51 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 FAM53AQ6NSI3 398 aaPredicted RBP12.06□□□□□ -0.48
ACTB-213ENST00000493945 ODF3L1Q8IXM7 274 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 OR13C8Q8NGS7 320 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 MARCH1Q8TCQ1 289 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 SLC2A9Q9NRM0 540 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 WASHC3Q9Y3C0 194 aa12.06□□□□□ -0.48
ACTB-213ENST00000493945 TEX13DA0A0J9YY54 714 aaPredicted RBP12.05□□□□□ -0.48
ACTB-213ENST00000493945 A0A1W2PPI3 338 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 TIMM23O14925 209 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 ATG12O94817 140 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 NDUFB6O95139 128 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 RLN1P04808 185 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 PIGPP57054 158 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 UBE2MP61081 183 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms