RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ETV6P41212 452 aa14.34□□□□□ -0.11
PDLIM7-208ENST00000493815 LUMP51884 338 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-208ENST00000493815 S1PR3Q99500 378 aa14.34□□□□□ -0.11
PDLIM7-208ENST00000493815 ZNF2Q9BSG1 426 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-208ENST00000493815 SDHAF2Q9NX18 166 aa14.34□□□□□ -0.11
PDLIM7-208ENST00000493815 A6NDX4 124 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 M0R1X1 148 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 GSTZ1O43708 216 aaPredicted RBP14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 CHST1O43916 411 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 IGKV1D-33P01593 117 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 IGKV1-33P01594 117 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 CT45A6P0DMU7 189 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 CT45A5P0DMU8 189 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 CT45A7P0DMV0 189 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 HES1Q14469 280 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 ZNF660Q6AZW8 331 aaPredicted RBP14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 FAAP20Q6NZ36 180 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 Q8N402 240 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 SECTM1Q8WVN6 248 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 NABP2Q9BQ15 211 aa14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 THAP7Q9BT49 309 aaPredicted RBP14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 RBMX2Q9Y388 322 aaKnown RBP14.33□□□□□ -0.11
PDLIM7-208ENST00000493815 TSPAN5P62079 268 aa14.33□□□□□ -0.12
PDLIM7-208ENST00000493815 KRTAP24-1Q3LI83 254 aa14.33□□□□□ -0.12
PDLIM7-208ENST00000493815 DHRS11Q6UWP2 260 aa14.33□□□□□ -0.12
PDLIM7-208ENST00000493815 TMEM17Q86X19 198 aa14.33□□□□□ -0.12
PDLIM7-208ENST00000493815 GIMAP1Q8WWP7 306 aa14.33□□□□□ -0.12
PDLIM7-208ENST00000493815 PTTG2Q9NZH5 202 aa14.33□□□□□ -0.12
PDLIM7-208ENST00000493815 FAM90A9PA6NNJ1 464 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 TXNL1O43396 289 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 IGLV2-14P01704 120 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 FAM106CPP0CH98 169 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 LSAMPQ13449 338 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 HABP2Q14520 560 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 RNASE10Q5GAN6 216 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 TMEM229BQ8NBD8 167 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 GPHA2Q96T91 129 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 SRRQ9GZT4 340 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 GHITMQ9H3K2 345 aa14.32□□□□□ -0.12
PDLIM7-208ENST00000493815 TAS2R19P59542 299 aa14.31□□□□□ -0.12
PDLIM7-208ENST00000493815 HERV-K104P61576 105 aa14.31□□□□□ -0.12
PDLIM7-208ENST00000493815 STEAP1BQ6NZ63 245 aa14.31□□□□□ -0.12
PDLIM7-208ENST00000493815 ZNF645Q8N7E2 425 aa14.31□□□□□ -0.12
PDLIM7-208ENST00000493815 OR6F1Q8NGZ6 308 aa14.31□□□□□ -0.12
PDLIM7-208ENST00000493815 FAM216AQ8WUB2 273 aa14.31□□□□□ -0.12
PDLIM7-208ENST00000493815 CCL28Q9NRJ3 127 aa14.31□□□□□ -0.12
PDLIM7-208ENST00000493815 RAB3DO95716 219 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 PTBP1P26599 531 aaKnown RBP eCLIP14.3□□□□□ -0.125e-12■■■■■ 40.8
PDLIM7-208ENST00000493815 SSBP1Q04837 148 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 ACTBL2Q562R1 376 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 VAX1Q5SQQ9 334 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 FAM71F2Q6NXP2 309 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 MFSD4AQ8N468 514 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 ZNF383Q8NA42 475 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 TRIM63Q969Q1 353 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 SDHCQ99643 169 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 SLC5A7Q9GZV3 580 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 CD74P04233 296 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 IFNA6P05013 189 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 CSF1P09603 554 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 TMEM11P17152 192 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 CD1BP29016 333 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 MOB3AQ96BX8 217 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 EAF1Q96JC9 268 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 RITA1Q96K30 269 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 PITPNC1Q9UKF7 332 aa14.3□□□□□ -0.12
PDLIM7-208ENST00000493815 ANKRD20A5PA0PJZ0 165 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 OR5H14A6NHG9 310 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 H0YJW9 148 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 TNFSF12O43508 249 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 RELBQ01201 579 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 BAK1Q16611 211 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 DHRS7BQ6IAN0 325 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 THNSL2Q86YJ6 484 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 OR4C16Q8NGL9 310 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 SLC25A33Q9BSK2 321 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 FXYD6Q9H0Q3 95 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 AKIP1Q9NQ31 210 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 TAS2R8Q9NYW2 309 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 GAB2Q9UQC2 676 aa14.29□□□□□ -0.12
PDLIM7-208ENST00000493815 SH2D7A6NKC9 451 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 LINC00473A8K010 186 aa14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 AMY2AP04746 511 aa14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 CRYBA1P05813 215 aa14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 TBPP20226 339 aa14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 SCGB2B2Q4G0G5 96 aa14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 ZNF818PQ6ZRF7 136 aa14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 C1RLQ9NZP8 487 aa14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 ZNF107Q9UII5 783 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-208ENST00000493815 H7C2Y5 167 aa14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 MOSP00540 346 aa14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 AKAIN1P0CW23 69 aa14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 GNRHRP30968 328 aa14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 DUTP33316 252 aaKnown RBP14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 RPL30P62888 115 aaKnown RBP14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 ZNF45Q02386 682 aa14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 OR2B11Q5JQS5 317 aa14.27□□□□□ -0.12
PDLIM7-208ENST00000493815 AADACL3Q5VUY0 350 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms