RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CGB7P0DN87 165 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 PPP1CCP36873 323 aaKnown RBP9.86□□□□□ -0.83
UPF3A-210ENST00000493727 CEACAM6P40199 344 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 DLX6P56179 175 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 HERV-K104P61576 105 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 HTD2P86397 168 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 GNMTQ14749 295 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 HERPUD1Q15011 391 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 MIDNQ504T8 468 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 MZT2BQ6NZ67 158 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 HEPN1Q6WQI6 88 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 POC5Q8NA72 575 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 OR10A7Q8NGE5 316 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 OR4D10Q8NGI6 311 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 OR56B4Q8NH76 319 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 DEDD2Q8WXF8 326 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 PALMDQ9NP74 551 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 SIRT7Q9NRC8 400 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 SCP2D1Q9UJQ7 156 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 RBM7Q9Y580 266 aaKnown RBP9.86□□□□□ -0.83
UPF3A-210ENST00000493727 SESN1Q9Y6P5 492 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 TRBV6-7A0A0A0MS04 114 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 LYRM1O43325 122 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 MMP23AO75900 390 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 TOX4O94842 621 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 IGHV1-8P0DP01 117 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 NFYAP23511 347 aaPredicted RBP9.85□□□□□ -0.83
UPF3A-210ENST00000493727 COX7A1P24310 79 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 FCGR2CP31995 323 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 RPL15P61313 204 aaKnown RBP9.85□□□□□ -0.83
UPF3A-210ENST00000493727 IFITM3Q01628 133 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 C1orf122Q6ZSJ8 110 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 OVCH2Q7RTZ1 564 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 ARRDC1Q8N5I2 433 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 TMEM86BQ8N661 226 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 OR52M1Q8NGK5 317 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 OR6F1Q8NGZ6 308 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 OR4F5Q8NH21 305 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 PRRT1Q99946 306 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 ZNF2Q9BSG1 426 aaPredicted RBP9.85□□□□□ -0.83
UPF3A-210ENST00000493727 PCGF1Q9BSM1 259 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 METTL8Q9H825 291 aaKnown RBP9.85□□□□□ -0.83
UPF3A-210ENST00000493727 LINC00574Q9H8X3 128 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 RDH8Q9NYR8 311 aa9.85□□□□□ -0.83
UPF3A-210ENST00000493727 DSCAML1Q8TD84 2053 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 KMT2CQ8NEZ4 4911 aaKnown RBP9.84□□□□□ -0.83
UPF3A-210ENST00000493727 HOXA3O43365 443 aaPredicted RBP9.84□□□□□ -0.83
UPF3A-210ENST00000493727 IGHV3-7P01780 117 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 GNG10P50151 68 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 FXYD4P59646 89 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 ASAH1Q13510 395 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 DEFB112Q30KQ8 113 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 VMO1Q7Z5L0 202 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 H1FOOQ8IZA3 346 aaPredicted RBP9.84□□□□□ -0.83
UPF3A-210ENST00000493727 OR2AK2Q8NG84 335 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 OR13D1Q8NGV5 346 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 ENKURQ8TC29 256 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 LEAP2Q969E1 77 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 TOMM40LQ969M1 308 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 C11orf54Q9H0W9 315 aaPredicted RBP9.84□□□□□ -0.83
UPF3A-210ENST00000493727 TMEM133Q9H2Q1 129 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 BEX1Q9HBH7 125 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 TBC1D24Q9ULP9 559 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 POMT1Q9Y6A1 747 aa9.84□□□□□ -0.83
UPF3A-210ENST00000493727 TOR1AO14656 332 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 PLA2G10O15496 165 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 YPEL1O60688 119 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 PGAM2P15259 253 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 AADACP22760 399 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 LUMP51884 338 aaPredicted RBP9.83□□□□□ -0.84
UPF3A-210ENST00000493727 LOXL3P58215 753 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 PRB3Q04118 309 aaPredicted RBP9.83□□□□□ -0.84
UPF3A-210ENST00000493727 LCE3BQ5TA77 95 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 NCR3LG1Q68D85 454 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 FAM53AQ6NSI3 398 aaPredicted RBP9.83□□□□□ -0.84
UPF3A-210ENST00000493727 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 Q6YL49 198 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 ETV3LQ6ZN32 361 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 IDO2Q6ZQW0 420 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 Q8N7P7 452 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 OR51S1Q8NGJ8 323 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 YPEL2Q96QA6 119 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 ABHD14AQ9BUJ0 271 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 CLEC7AQ9BXN2 247 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 SIRPDQ9H106 197 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 HEXA-AS1Q9H8Q6 139 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 OR2W1Q9Y3N9 320 aa9.83□□□□□ -0.84
UPF3A-210ENST00000493727 KIAA2026Q5HYC2 2103 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 MDFIC2A0A1B0GVS7 189 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 FAM240BA0A1B0GVZ2 78 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 A0A1W2PPE3 182 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 NDUFA7O95182 113 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 PPYP01298 95 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 PLA2G1BP04054 148 aaKnown RBP9.82□□□□□ -0.84
UPF3A-210ENST00000493727 ZNF735P0CB33 412 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 MDKP21741 143 aaPredicted RBP9.82□□□□□ -0.84
UPF3A-210ENST00000493727 RAB7AP51149 207 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 DLX1P56177 255 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 KLRD1Q13241 179 aa9.82□□□□□ -0.84
UPF3A-210ENST00000493727 MORN2Q502X0 79 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms