RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ZNF816Q0VGE8 651 aaPredicted RBP10.08□□□□□ -0.8
SNX17-208ENST00000493711 RBMS2Q15434 407 aaKnown RBP10.08□□□□□ -0.8
SNX17-208ENST00000493711 AANATQ16613 207 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 TPTE2P1Q5T6R2 138 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 AADACL3Q5VUY0 350 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 C11orf88Q6PI97 169 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 TGIF2LXQ8IUE1 241 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 PDZD9Q8IXQ8 264 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 TOMM40LQ969M1 308 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 ST6GALNAC6Q969X2 333 aa10.08□□□□□ -0.8
SNX17-208ENST00000493711 HSD17B10Q99714 261 aaKnown RBP10.08□□□□□ -0.8
SNX17-208ENST00000493711 PARP12Q9H0J9 701 aaKnown RBP10.08□□□□□ -0.8
SNX17-208ENST00000493711 C14orf166Q9Y224 244 aaKnown RBP10.08□□□□□ -0.8
SNX17-208ENST00000493711 SAA2-SAA4A0A096LPE2 208 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 IGKV1D-13A0A0B4J2D9 117 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 A0A1W2PRD5 423 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 A0A1W2PRF3 423 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 A0A1W2PRM7 423 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 GPR31O00270 319 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 HSD17B6O14756 317 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 SAA2P0DJI9 122 aaPredicted RBP10.07□□□□□ -0.8
SNX17-208ENST00000493711 IGKV1-13P0DP09 117 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 SLC6A1P30531 599 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 BRS3P32247 399 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 DLX1P56177 255 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 ABCA11PQ4W5N1 156 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 UTF1Q5T230 341 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 FAM53AQ6NSI3 398 aaPredicted RBP10.07□□□□□ -0.8
SNX17-208ENST00000493711 FAAP20Q6NZ36 180 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 ZNF66Q6ZN08 573 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 TCTEX1D1Q8N7M0 179 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 ZDHHC22Q8N966 263 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 POC5Q8NA72 575 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 BVESQ8NE79 360 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 ABHD14BQ96IU4 210 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 SMR3AQ99954 134 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 RSRP1Q9BUV0 290 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 FXYD6Q9H0Q3 95 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 DPAGT1Q9H3H5 408 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 RNF150Q9ULK6 438 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 TBC1D24Q9ULP9 559 aa10.07□□□□□ -0.8
SNX17-208ENST00000493711 IGHV3OR16-10A0A075B7F0 116 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 FAM240BA0A1B0GVZ2 78 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 NDUFB6O95139 128 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
SNX17-208ENST00000493711 GNRHRP30968 328 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 MC5RP33032 325 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 THBS3P49746 956 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 DYNLT3P51808 116 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 RND3P61587 244 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 IFITM3Q01628 133 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 PRB3Q04118 309 aaPredicted RBP10.06□□□□□ -0.8
SNX17-208ENST00000493711 CATR1Q13166 79 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 CBX3Q13185 183 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 BRD3OSQ6XYD6 125 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 ODF3L1Q8IXM7 274 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 DRAM1Q8N682 238 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 ENKURQ8TC29 256 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 RTN4IP1Q8WWV3 396 aaPredicted RBP10.06□□□□□ -0.8
SNX17-208ENST00000493711 MEGF9Q9H1U4 602 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 CCL28Q9NRJ3 127 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 SDHAF2Q9NX18 166 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 GPR132Q9UNW8 380 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 PRELID3BQ9Y3B1 194 aa10.06□□□□□ -0.8
SNX17-208ENST00000493711 VGLL3A8MV65 326 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 M0R1X1 148 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 PTTG1O95997 202 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 RRASP10301 218 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 SRD5A1P18405 259 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 KIR2DS2P43631 304 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 TAS2R31P59538 309 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 UBE2MP61081 183 aaKnown RBP10.05□□□□□ -0.8
SNX17-208ENST00000493711 SSX2Q16385 188 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 RUSC1-AS1Q66K80 236 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 RBMS3Q6XE24 437 aaKnown RBP10.05□□□□□ -0.8
SNX17-208ENST00000493711 KCTD9Q7L273 389 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 LHFPL4Q7Z7J7 247 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 OR13C8Q8NGS7 320 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 MARCH1Q8TCQ1 289 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 CD300LFQ8TDQ1 290 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 ZNF251Q9BRH9 671 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 PRDM13Q9H4Q3 707 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 HILPDAQ9Y5L2 63 aa10.05□□□□□ -0.8
SNX17-208ENST00000493711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.05□□□□□ -0.87e-9■■□□□ 14.4
SNX17-208ENST00000493711 CR1P17927 2039 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 PIGBOS1A0A0B4J2F0 54 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 IGHV1-3A0A0C4DH29 117 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 A0A0U1RQK1 487 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 APOA2P02652 100 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 CD1BP29016 333 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 BTCP35070 178 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 RAB13P51153 203 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 CCR6P51684 374 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 HABP2Q14520 560 aaPredicted RBP10.04□□□□□ -0.8
SNX17-208ENST00000493711 RPL39P5Q59GN2 51 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 ZNF818PQ6ZRF7 136 aa10.04□□□□□ -0.8
SNX17-208ENST00000493711 MOB3BQ86TA1 216 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms