RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TREM2Q9NZC2 230 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 SS18L1O75177 396 aaPredicted RBP17.37■□□□□ 0.37
RNF40-203ENST00000493683 FAM106CPP0CH98 169 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 RFLNBQ8N5W9 214 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 SMRP1Q8NCR6 262 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 SP7Q8TDD2 431 aaPredicted RBP17.37■□□□□ 0.37
RNF40-203ENST00000493683 COL18A1P39060 1754 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 IGHV4-34P06331 123 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 CKS2P33552 79 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 IGHV1-45A0A0A0MS14 117 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 LEPROTL1O95214 131 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 RAB9AP51151 201 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 TMEM171Q8WVE6 324 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 ZNF488Q96MN9 340 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 SOSTQ9BQB4 213 aa17.37■□□□□ 0.37
RNF40-203ENST00000493683 MPTX1A8MV57 137 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 RHOVQ96L33 236 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 SCN1AP35498 2009 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 J3KRW8 73 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 J3QW42 95 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 LOXL3P58215 753 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 SMIM8Q96KF7 97 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 MRPL32Q9BYC8 188 aaKnown RBP17.36■□□□□ 0.37
RNF40-203ENST00000493683 NPIPB13A6NJU9 1138 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 NPIPB4C9JG80 1138 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 WNT9BO14905 357 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 F12P00748 615 aaPredicted RBP17.36■□□□□ 0.37
RNF40-203ENST00000493683 HSPE1P61604 102 aaKnown RBP17.36■□□□□ 0.37
RNF40-203ENST00000493683 SPSB4Q96A44 273 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 PCGF1Q9BSM1 259 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 JPT1Q9UK76 154 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 FGFRL1Q8N441 504 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 GPR146Q96CH1 333 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 MAP1LC3AQ9H492 121 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 SMCHD1A6NHR9 2005 aa17.36■□□□□ 0.37
RNF40-203ENST00000493683 C17orf51A8MQB3 221 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 PRR33A8MZF0 331 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 IGHMP01871 453 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 SCTP09683 121 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 ADIPOQQ15848 244 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 ZNF658BQ4V348 819 aaPredicted RBP17.35■□□□□ 0.37
RNF40-203ENST00000493683 FAM181AQ8N9Y4 354 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 PRDM14Q9GZV8 571 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 MRPL18Q9H0U6 180 aaKnown RBP17.35■□□□□ 0.37
RNF40-203ENST00000493683 C8orf88P0DMB2 117 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 FOLR2P14207 255 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 C19orf54Q5BKX5 351 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 ZNF502Q8TBZ5 544 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 FAM206AQ9NX38 181 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 DANCRP0C864 163 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 IGKV1-8A0A0C4DH67 115 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 MOSPD3O75425 235 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 FUT5Q11128 374 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 ZNF385CQ66K41 422 aaPredicted RBP17.35■□□□□ 0.37
RNF40-203ENST00000493683 DDA1Q9BW61 102 aa17.35■□□□□ 0.37
RNF40-203ENST00000493683 SLC25A34Q6PIV7 304 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 IDI2-AS1Q9NZ38 188 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 CDK5RAP2Q96SN8 1893 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 A0A0B4J293 547 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 CDX1P47902 265 aaPredicted RBP17.34■□□□□ 0.37
RNF40-203ENST00000493683 PSMG3Q9BT73 122 aaPredicted RBP17.34■□□□□ 0.37
RNF40-203ENST00000493683 GPR61Q9BZJ8 451 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 STRCQ7RTU9 1775 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 LOC389332A0A1B0GUA5 103 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 AGAP20933 346 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 OR8G5Q8NG78 346 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 DNAJC4Q9NNZ3 241 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 KCNAB3O43448 404 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 SPINK2P20155 84 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 TNFRSF9Q07011 255 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 NHLRC3Q5JS37 347 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 QTRT1Q9BXR0 403 aaKnown RBP17.34■□□□□ 0.37
RNF40-203ENST00000493683 KCNE5Q9UJ90 142 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 TMEM56-RWDD3S4R434 201 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 CDK2AP1O14519 115 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 ZNF324O75467 553 aaPredicted RBP17.34■□□□□ 0.37
RNF40-203ENST00000493683 PRR7Q8TB68 274 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 GALNT14Q96FL9 552 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 TNFRSF19Q9NS68 423 aa17.34■□□□□ 0.37
RNF40-203ENST00000493683 LOC390937A0A1W2PQ73 354 aa17.33■□□□□ 0.37
RNF40-203ENST00000493683 PGPA6NDG6 321 aa17.33■□□□□ 0.37
RNF40-203ENST00000493683 REG1BP48304 166 aa17.33■□□□□ 0.37
RNF40-203ENST00000493683 Q96M66 194 aa17.33■□□□□ 0.37
RNF40-203ENST00000493683 CCL13Q99616 98 aa17.33■□□□□ 0.37
RNF40-203ENST00000493683 METTL1Q9UBP6 276 aaKnown RBP17.33■□□□□ 0.37
RNF40-203ENST00000493683 LAMB2P55268 1798 aa17.33■□□□□ 0.37
RNF40-203ENST00000493683 SLC35B1P78383 322 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 SMUG1Q53HV7 270 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 C16orf92Q96LL3 132 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 TPRP12270 2363 aaKnown RBP17.33■□□□□ 0.36
RNF40-203ENST00000493683 FGF5P12034 268 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 OR10S1Q8NGN2 331 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.36
RNF40-203ENST00000493683 A0A1W2PPE3 182 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 HTN1P15515 57 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 DDTP30046 118 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 CXorf66Q5JRM2 361 aaPredicted RBP17.33■□□□□ 0.36
RNF40-203ENST00000493683 TCF24Q7RTU0 167 aa17.33■□□□□ 0.36
RNF40-203ENST00000493683 GCM2O75603 506 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms