RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 FN1P02751 2386 aaKnown RBP12.72□□□□□ -0.37
HPS4-216ENST00000493455 NAV3Q8IVL0 2385 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 IGHV1-3A0A0C4DH29 117 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 CENPXA8MT69 81 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 H3BUX3 64 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 TIMM23O14925 209 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 UPK1BO75841 260 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 LINC00205P59089 165 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 HES1Q14469 280 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 LRRC75BQ2VPJ9 315 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 CCDC144NLQ6NUI1 221 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 C16orf87Q6PH81 154 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 IDO2Q6ZQW0 420 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 ZNF818PQ6ZRF7 136 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 ZNF833PQ6ZTB9 187 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 MARCH1Q8TCQ1 289 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 CAPSLQ8WWF8 208 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 ST6GALNAC6Q969X2 333 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 PRRT1Q99946 306 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 SCP2D1Q9UJQ7 156 aa12.71□□□□□ -0.37
HPS4-216ENST00000493455 ANK3Q12955 4377 aaKnown RBP12.71□□□□□ -0.38
HPS4-216ENST00000493455 MTORP42345 2549 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 A0A1W2PPI3 338 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 HOXA3O43365 443 aaPredicted RBP12.7□□□□□ -0.38
HPS4-216ENST00000493455 IGHV4-59P01825 116 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 PI3P19957 117 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 ZNF816Q0VGE8 651 aaPredicted RBP12.7□□□□□ -0.38
HPS4-216ENST00000493455 PHLDA2Q53GA4 152 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 OR2B11Q5JQS5 317 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 AADACL3Q5VUY0 350 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 TERB2Q8NHR7 220 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 ZNF418Q8TF45 676 aaPredicted RBP12.7□□□□□ -0.38
HPS4-216ENST00000493455 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
HPS4-216ENST00000493455 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
HPS4-216ENST00000493455 BTBD17A6NE02 478 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 H7C2Y5 167 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 LYRM1O43325 122 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 TXNL1O43396 289 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 BRS3P32247 399 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 CCR6P51684 374 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 ZNF137PP52743 207 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 HNF4GQ14541 408 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 ABCA11PQ4W5N1 156 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 Q6YL49 198 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 LHFPL1Q86WI0 220 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 OR8H3Q8N146 312 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.69□□□□□ -0.38
HPS4-216ENST00000493455 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 NABP2Q9BQ15 211 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 GHITMQ9H3K2 345 aa12.69□□□□□ -0.38
HPS4-216ENST00000493455 NAP1L6A6NFF2 107 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 GPR31O00270 319 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 PLA2G10O15496 165 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 PROP1O75360 226 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 SLC22A5O76082 557 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 IGKV1D-33P01593 117 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 IGKV1-33P01594 117 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 SNRNP70P08621 437 aaKnown RBP12.68□□□□□ -0.38
HPS4-216ENST00000493455 CT45A6P0DMU7 189 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 CT45A5P0DMU8 189 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 CT45A7P0DMV0 189 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 GNRHRP30968 328 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 IFITM3Q01628 133 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 FAM71F2Q6NXP2 309 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 KCTD9Q7L273 389 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 SLC38A6Q8IZM9 456 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 OR13C8Q8NGS7 320 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 OR51H1Q8NH63 302 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 FAM216AQ8WUB2 273 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 MEGF9Q9H1U4 602 aa12.68□□□□□ -0.38
HPS4-216ENST00000493455 C14orf166Q9Y224 244 aaKnown RBP12.68□□□□□ -0.38
HPS4-216ENST00000493455 DNAJC9-AS1A6NH13 148 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 PEX14O75381 377 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 IGLV2-14P01704 120 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 APOA2P02652 100 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 RLN1P04808 185 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 IER3P46695 156 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 THBS3P49746 956 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 SRSF2Q01130 221 aaKnown RBP12.67□□□□□ -0.38
HPS4-216ENST00000493455 LPCAT3Q6P1A2 487 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 TMEM219Q86XT9 240 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 CMTM1Q8IZ96 169 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 ZNF383Q8NA42 475 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 BORCS5Q969J3 196 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 C7orf50Q9BRJ6 194 aaKnown RBP12.67□□□□□ -0.38
HPS4-216ENST00000493455 DPAGT1Q9H3H5 408 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
HPS4-216ENST00000493455 LINC00473A8K010 186 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 TMEM11P17152 192 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 S100GP29377 79 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 DUTP33316 252 aaKnown RBP12.66□□□□□ -0.38
HPS4-216ENST00000493455 RPL30P62888 115 aaKnown RBP12.66□□□□□ -0.38
HPS4-216ENST00000493455 FBLN7Q53RD9 439 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 BVESQ8NE79 360 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 ZFAND1Q8TCF1 268 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 SSMEM1Q8WWF3 244 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 DEDD2Q8WXF8 326 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms