RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NDUFA2O43678 99 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 CLDN14O95500 239 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 EPHA1P21709 976 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 Q3ZCU0 254 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 FAM74A1Q5RGS3 127 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 RPL7L1Q6DKI1 246 aaKnown RBP11.62□□□□□ -0.55
PTPN7-216ENST00000492977 OR2C3Q8N628 320 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 CD300LFQ8TDQ1 290 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 FAM122AQ96E09 287 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 SLC25A31Q9H0C2 315 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 COA4Q9NYJ1 87 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 PFDN2Q9UHV9 154 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 LAMP3Q9UQV4 416 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 MMP24Q9Y5R2 645 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 LINC00312Q9Y6C7 94 aa11.62□□□□□ -0.55
PTPN7-216ENST00000492977 BORCS7-ASMTA0A0B4J1R7 106 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 KIAA1324LA8MWY0 1029 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-216ENST00000492977 CHST1O43916 411 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 SSSCA1O60232 199 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 NDUFB7P17568 137 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 OMGP23515 440 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 BTNL3Q6UXE8 466 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 Q6ZRM9 215 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 TCF23Q7RTU1 214 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 SPAG16Q8N0X2 631 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 UBAC2Q8NBM4 344 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 OR10A7Q8NGE5 316 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 CXorf58Q96LI9 332 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 RAB40CQ96S21 281 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 MAGT1Q9H0U3 335 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 LYRM2Q9NU23 88 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-216ENST00000492977 IDI2-AS1Q9NZ38 188 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 KAAG1Q9UBP8 84 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 LPAR3Q9UBY5 353 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 CACNG5Q9UF02 275 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 CHD8Q9HCK8 2581 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 HCFC1P51610 2035 aa11.61□□□□□ -0.55
PTPN7-216ENST00000492977 DIDO1Q9BTC0 2240 aaKnown RBP11.6□□□□□ -0.55
PTPN7-216ENST00000492977 C17orf98A8MV24 154 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 FGF16O43320 207 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 RAMP3O60896 148 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 FSTL3O95633 263 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 AGAP20933 346 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 PPOXP50336 477 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 ZNF134P52741 427 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 BRWD1-AS2P59051 145 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 EWSR1Q01844 656 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTPN7-216ENST00000492977 HFEQ30201 348 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 LRRC10Q5BKY1 277 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-216ENST00000492977 RNF141Q8WVD5 230 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
PTPN7-216ENST00000492977 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 FAM24AA6NFZ4 105 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 LINC00473A8K010 186 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 FAM90A26D6RGX4 464 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 NDUFB3O43676 98 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 P0C879 139 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 DUTP33316 252 aaKnown RBP11.59□□□□□ -0.55
PTPN7-216ENST00000492977 CAV2P51636 162 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 RPL31P62899 125 aaKnown RBP11.59□□□□□ -0.55
PTPN7-216ENST00000492977 NHLH2Q02577 135 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 AANATQ16613 207 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 TMED6Q8WW62 240 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 REG4Q9BYZ8 158 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 ARV1Q9H2C2 271 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 GAL3ST2Q9H3Q3 398 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 COL6A6A6NMZ7 2263 aa11.59□□□□□ -0.55
PTPN7-216ENST00000492977 MFSD2BA6NFX1 497 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 TOR1AO14656 332 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 PROP1O75360 226 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 RPL23AP62750 156 aaKnown RBP11.58□□□□□ -0.55
PTPN7-216ENST00000492977 BAXQ07812 192 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 ZNF816Q0VGE8 651 aaPredicted RBP11.58□□□□□ -0.55
PTPN7-216ENST00000492977 IZUMO4Q1ZYL8 232 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 CT45A1Q5HYN5 189 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 TMEM252Q8N6L7 170 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 CT45A3Q8NHU0 189 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 BSCL2Q96G97 398 aaPredicted RBP11.58□□□□□ -0.55
PTPN7-216ENST00000492977 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 RPUSD1Q9UJJ7 312 aaKnown RBP11.58□□□□□ -0.55
PTPN7-216ENST00000492977 WSB1Q9Y6I7 421 aa11.58□□□□□ -0.55
PTPN7-216ENST00000492977 PKDREJQ9NTG1 2253 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 IGSF23A1L1A6 192 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 M0R1X1 148 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 RAB29O14966 203 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTPN7-216ENST00000492977 SYNGR2O43760 224 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 S1PR2O95136 353 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 TMEM50AO95807 157 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 KRASP01116 189 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 FAM157CP0CG43 387 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 G6PCP35575 357 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 KIR2DS2P43631 304 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 PAX9P55771 341 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 TAS2R30P59541 319 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 OR2B11Q5JQS5 317 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms