RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CSMD1Q96PZ7 3565 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 PDZD2O15018 2839 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 C13orf42A0A1B0GVH6 325 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 TEX46H3BTG2 121 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 NDUFS8O00217 210 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 GNRHRP30968 328 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 LOXL3P58215 753 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 CLEC2AQ6UVW9 174 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 STPG2Q8N412 459 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 PIMREGQ9BSJ6 248 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 PARP12Q9H0J9 701 aaKnown RBP11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 IDI2-AS1Q9NZ38 188 aa11.6□□□□□ -0.55
PDZRN3-210ENST00000492909 YPEL1O60688 119 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 CCL3L1P16619 93 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 PIGPP57054 158 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 SMUG1Q53HV7 270 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 OR10A7Q8NGE5 316 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 STOML3Q8TAV4 291 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 EDARADDQ8WWZ3 215 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 YPEL2Q96QA6 119 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 SLC2A9Q9NRM0 540 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 RPUSD1Q9UJJ7 312 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 ANKRD17O75179 2603 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 TEX13DA0A0J9YY54 714 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 A0A1W2PPH5 198 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 GPR31O00270 319 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 PHF1O43189 567 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 IGHV2-5P01817 119 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 LYL1P12980 280 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 SLC9A3R2Q15599 337 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 MORN2Q502X0 79 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 PHLDA2Q53GA4 152 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 PXDC1Q5TGL8 231 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 HEPN1Q6WQI6 88 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 LDLRAD3Q86YD5 345 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 CMTM1Q8IZ96 169 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 CCDC71LQ8N9Z2 235 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 OR52M1Q8NGK5 317 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 OR8U1Q8NH10 309 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 C8orf46Q8TAG6 207 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 C10orf105Q8TEF2 133 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 DCUN1D4Q92564 292 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 RNF126Q9BV68 326 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 CCL28Q9NRJ3 127 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 GFOD1Q9NXC2 390 aa11.59□□□□□ -0.55
PDZRN3-210ENST00000492909 PPIAL4CA0A0B4J2A2 164 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 HSD17B6O14756 317 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 PPIAL4GP0DN37 164 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 NFYBP25208 207 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 DSCR9P59020 149 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 SUPT4H1P63272 117 aaKnown RBP11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 BTN1A1Q13410 526 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 PRAMEF5Q5TYX0 476 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 ZNF818PQ6ZRF7 136 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 SGPP2Q8IWX5 399 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 CLDND2Q8NHS1 167 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 LHFPL5Q8TAF8 219 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 FAM216AQ8WUB2 273 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 RTN4IP1Q8WWV3 396 aaPredicted RBP11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 KCNS2Q9ULS6 477 aa11.58□□□□□ -0.56
PDZRN3-210ENST00000492909 NOTCH2Q04721 2471 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 CRYM-AS1A6NIL9 109 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 MMP23AO75900 390 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 S100GP29377 79 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 DLX6P56179 175 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 ANKRD55Q3KP44 614 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 PRSS54Q6PEW0 395 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 MS4A7Q9GZW8 240 aaPredicted RBP11.57□□□□□ -0.56
PDZRN3-210ENST00000492909 VWC2LB2RUY7 222 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 H0YIZ8 118 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 FGF16O43320 207 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 ADAP1O75689 374 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 TPT1P13693 172 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 RND3P61587 244 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 LMO4P61968 165 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 LY6G5BQ8NDX9 201 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 AKR1E2Q96JD6 320 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 C2orf50Q96LR7 162 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 BEX4Q9NWD9 120 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 PSG11Q9UQ72 335 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 ARHGAP32A7KAX9 2087 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 LOC105371242A0A075B767 164 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 C17orf98A8MV24 154 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 C22orf46C9J442 243 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 ITGB1BP1O14713 200 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 IGHV3-7P01780 117 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 LIPFP07098 398 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 RAB7AP51149 207 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 ZNF645Q8N7E2 425 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 AGMATQ9BSE5 352 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 NAA60Q9H7X0 242 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 CYTL1Q9NRR1 136 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 RNF150Q9ULK6 438 aa11.56□□□□□ -0.56
PDZRN3-210ENST00000492909 KCNIP3Q9Y2W7 256 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms