RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SERPINB10P48595 397 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 CFHR3Q02985 330 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 C5orf64Q2M2E5 130 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 IDNKQ5T6J7 187 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 ETV3LQ6ZN32 361 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 OR5AN1Q8NGI8 311 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 OR10J5Q8NHC4 309 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 NUDCD2Q8WVJ2 157 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 RHBDL2Q9NX52 303 aa19.37■□□□□ 0.69
UPF3A-209ENST00000492270 TMEM235A6NFC5 223 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 H7C2Y5 167 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 RRP9O43818 475 aaKnown RBP19.36■□□□□ 0.69
UPF3A-209ENST00000492270 HLA-DRB1P01911 266 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 RPLP1P05386 114 aaKnown RBP19.36■□□□□ 0.69
UPF3A-209ENST00000492270 OR8U9P0C7N5 309 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 PNLIPRP3Q17RR3 467 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 KPRPQ5T749 579 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-209ENST00000492270 TEX38Q6PEX7 206 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 C8orf86Q6ZUL3 223 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 COMMD1Q8N668 190 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 ZNF383Q8NA42 475 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 KLHL30-AS1Q8NEE0 82 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 OR8U1Q8NH10 309 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 SLC25A38Q96DW6 304 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 YIPF6Q96EC8 236 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 C5orf30Q96GV9 206 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 OR2D2Q9H210 308 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 FBXL15Q9H469 300 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 KIAA1456Q9P272 454 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 WASHC3Q9Y3C0 194 aa19.36■□□□□ 0.69
UPF3A-209ENST00000492270 IGHV7-81A0A0B4J1V7 117 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 ATP6V0E1O15342 81 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 PRB2P02812 416 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-209ENST00000492270 IGF1P05019 195 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 IGLL1P15814 213 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 VDAC1P21796 283 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 MC5RP33032 325 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 ARL6IP1Q15041 203 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 HACD4Q5VWC8 232 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 Q6ZS49 121 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 WFDC9Q8NEX5 89 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 PARP11Q9NR21 331 aa19.35■□□□□ 0.69
UPF3A-209ENST00000492270 TGP01266 2768 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 NUDT19A8MXV4 375 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 M0R1X1 148 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 DTYMKP23919 212 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 SRSF7Q16629 238 aaKnown RBP eCLIP19.34■□□□□ 0.69
UPF3A-209ENST00000492270 ZNF260Q3ZCT1 412 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 GINS4Q9BRT9 223 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 GON7Q9BXV9 100 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 OR51J1Q9H342 316 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 ZFP57Q9NU63 452 aa19.34■□□□□ 0.69
UPF3A-209ENST00000492270 DNAH3Q8TD57 4116 aa19.33■□□□□ 0.69
UPF3A-209ENST00000492270 G3V318 75 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 RRHO14718 337 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 AIREO43918 545 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 SSX5O60225 188 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 DIRAS3O95661 229 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 IGKV1-16P04430 117 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 TFAP2AP05549 437 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 GSTP1P09211 210 aaKnown RBP19.33■□□□□ 0.68
UPF3A-209ENST00000492270 LSM3P62310 102 aaKnown RBP19.33■□□□□ 0.68
UPF3A-209ENST00000492270 NDPQ00604 133 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 LIN54Q6MZP7 749 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 ST6GALNAC5Q9BVH7 336 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 VCX3AQ9NNX9 186 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 SDHAF2Q9NX18 166 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 ZNF580Q9UK33 172 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 WSB1Q9Y6I7 421 aa19.33■□□□□ 0.68
UPF3A-209ENST00000492270 SCGNO76038 276 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 FOXE3Q13461 319 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 TIMM50Q3ZCQ8 353 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 CXorf66Q5JRM2 361 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-209ENST00000492270 ZNF695Q8IW36 515 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 H1FOOQ8IZA3 346 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-209ENST00000492270 LINC00482Q8N8I6 264 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-209ENST00000492270 DUX3Q96PT4 197 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 FBXO7Q9Y3I1 522 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 ETV7Q9Y603 341 aa19.32■□□□□ 0.68
UPF3A-209ENST00000492270 FCN1O00602 326 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 RBBP9O75884 186 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 IGHG4P01861 327 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 THBS3P49746 956 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 SCAND1P57086 179 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 GNG2P59768 71 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 PLGLAQ15195 96 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 MRPL41Q8IXM3 137 aaKnown RBP19.31■□□□□ 0.68
UPF3A-209ENST00000492270 RNF152Q8N8N0 203 aa19.31■□□□□ 0.68
UPF3A-209ENST00000492270 TRIM64CA6NLI5 447 aa19.3■□□□□ 0.68
UPF3A-209ENST00000492270 ELANEP08246 267 aa19.3■□□□□ 0.68
UPF3A-209ENST00000492270 PPIFP30405 207 aaKnown RBP19.3■□□□□ 0.68
UPF3A-209ENST00000492270 PSG5Q15238 335 aa19.3■□□□□ 0.68
UPF3A-209ENST00000492270 RBM7Q9Y580 266 aaKnown RBP19.3■□□□□ 0.68
UPF3A-209ENST00000492270 TRAV18A0A075B6X5 111 aa19.29■□□□□ 0.68
UPF3A-209ENST00000492270 APOA2P02652 100 aa19.29■□□□□ 0.68
UPF3A-209ENST00000492270 PSMB8P28062 276 aa19.29■□□□□ 0.68
UPF3A-209ENST00000492270 RPS19P39019 145 aaKnown RBP19.29■□□□□ 0.68
UPF3A-209ENST00000492270 RPS16P62249 146 aaKnown RBP19.29■□□□□ 0.68
UPF3A-209ENST00000492270 DEFB136Q30KP8 78 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms