RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 LOC100506127A0A0U1RQW1 187 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 H0YJW9 148 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 RBBP9O75884 186 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 NDUFA3O95167 84 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 DUS4LO95620 317 aaKnown RBP11.85□□□□□ -0.51
USP39-217ENST00000491659 DIRAS3O95661 229 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
USP39-217ENST00000491659 GSTP1P09211 210 aaKnown RBP11.85□□□□□ -0.51
USP39-217ENST00000491659 PLGLAQ15195 96 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 LINC00482Q8N8I6 264 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.85□□□□□ -0.51
USP39-217ENST00000491659 OR10J5Q8NHC4 309 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 MAFIPQ8WZ33 124 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 CENPOQ9BU64 300 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 OR51J1Q9H342 316 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 PARP11Q9NR21 331 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 NECAP2Q9NVZ3 263 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 RNF150Q9ULK6 438 aa11.85□□□□□ -0.51
USP39-217ENST00000491659 ATP6V0E1O15342 81 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 APOA2P02652 100 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 TFAP2AP05549 437 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 GSTT2P0CG29 244 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 GSTT2BP0CG30 244 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 CD36P16671 472 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 SDC2P34741 201 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 MYCNOSP40205 109 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 THBS3P49746 956 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 CFHR3Q02985 330 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 IGSF11Q5DX21 431 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 LIN54Q6MZP7 749 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 ETV3LQ6ZN32 361 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 OR5AN1Q8NGI8 311 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 LGALS14Q8TCE9 139 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 GINS4Q9BRT9 223 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 GPR61Q9BZJ8 451 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 TOLLIPQ9H0E2 274 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 VCX3AQ9NNX9 186 aa11.84□□□□□ -0.51
USP39-217ENST00000491659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP39-217ENST00000491659 ZNF230Q9UIE0 474 aaPredicted RBP11.84□□□□□ -0.51
USP39-217ENST00000491659 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 IGHV7-81A0A0B4J1V7 117 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 M0R1X1 148 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 RRHO14718 337 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 TNFAIP8O95379 198 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 IGHG4P01861 327 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 PRB2P02812 416 aaPredicted RBP11.83□□□□□ -0.52
USP39-217ENST00000491659 SNRPBP14678 240 aaKnown RBP11.83□□□□□ -0.52
USP39-217ENST00000491659 MXD1Q05195 221 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 SRSF7Q16629 238 aaKnown RBP eCLIP11.83□□□□□ -0.52
USP39-217ENST00000491659 TIMM50Q3ZCQ8 353 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 LCNL1Q6ZST4 164 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 MRPL41Q8IXM3 137 aaKnown RBP11.83□□□□□ -0.52
USP39-217ENST00000491659 RNF152Q8N8N0 203 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 DRAXINQ8NBI3 349 aaPredicted RBP11.83□□□□□ -0.52
USP39-217ENST00000491659 RNF5Q99942 180 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 OR2D2Q9H210 308 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 FBXL15Q9H469 300 aa11.83□□□□□ -0.52
USP39-217ENST00000491659 RBM7Q9Y580 266 aaKnown RBP11.83□□□□□ -0.52
USP39-217ENST00000491659 OR8U9P0C7N5 309 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 DTYMKP23919 212 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 CDX1P47902 265 aaPredicted RBP11.82□□□□□ -0.52
USP39-217ENST00000491659 SCAND1P57086 179 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 CDNFQ49AH0 187 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 FOXB2Q5VYV0 432 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 Q6ZS49 121 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 PDPNQ86YL7 162 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 ZNF383Q8NA42 475 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 OR8U1Q8NH10 309 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 ABHD5Q8WTS1 349 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 DPF1Q92782 380 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 TSNAXQ99598 290 aaKnown RBP11.82□□□□□ -0.52
USP39-217ENST00000491659 MCRIP2Q9BUT9 160 aaKnown RBP11.82□□□□□ -0.52
USP39-217ENST00000491659 RNF167Q9H6Y7 350 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 RHBDL2Q9NX52 303 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 ETV7Q9Y603 341 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 WSB1Q9Y6I7 421 aa11.82□□□□□ -0.52
USP39-217ENST00000491659 TRAV41A0A0B4J266 112 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 SPDEFO95238 335 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 CLEC2LP0C7M8 214 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 PSMB8P28062 276 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 GNG2P59768 71 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 RPS16P62249 146 aaKnown RBP11.81□□□□□ -0.52
USP39-217ENST00000491659 PITPNAQ00169 270 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 CBX3Q13185 183 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 ECSCRQ19T08 205 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 IDNKQ5T6J7 187 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 HACD4Q5VWC8 232 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 ZNF660Q6AZW8 331 aaPredicted RBP11.81□□□□□ -0.52
USP39-217ENST00000491659 TMEM65Q6PI78 240 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 MRAPQ8TCY5 172 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 P2RX4Q99571 388 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 AURKAIP1Q9NWT8 199 aaPredicted RBP11.81□□□□□ -0.52
USP39-217ENST00000491659 SDHAF2Q9NX18 166 aa11.81□□□□□ -0.52
USP39-217ENST00000491659 METTL1Q9UBP6 276 aaKnown RBP11.81□□□□□ -0.52
USP39-217ENST00000491659 NOTCH3Q9UM47 2321 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 A0A087WXM4 84 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 TMEM235A6NFC5 223 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 A6NHS1 94 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms