RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 TESK1Q15569 626 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 HAGHQ16775 308 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 TMEM241Q24JQ0 296 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 HLA-BQ31612 363 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 OR2T2Q6IF00 324 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 SLC25A24Q6NUK1 477 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 Q6P435 159 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 ZNF66Q6ZN08 573 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 PPP1R32Q7Z5V6 425 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 THNSL2Q86YJ6 484 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 CISD2Q8N5K1 135 aaKnown RBP4.91□□□□□ -1.62
VPS41-214ENST00000490924 ZNF645Q8N7E2 425 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 CPEB3Q8NE35 698 aaKnown RBP4.91□□□□□ -1.62
VPS41-214ENST00000490924 OR51G1Q8NGK1 321 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 OR52E5Q8NH55 327 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 RNASE11Q8TAA1 199 aaKnown RBP4.91□□□□□ -1.62
VPS41-214ENST00000490924 C20orf24Q9BUV8 137 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 TMEM147Q9BVK8 224 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 RTL8AQ9BWD3 113 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 GPR87Q9BY21 358 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 NCOR1P1Q9H4R4 102 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 ZNF703Q9H7S9 590 aaPredicted RBP4.91□□□□□ -1.62
VPS41-214ENST00000490924 CCL28Q9NRJ3 127 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 OCIAD1Q9NX40 245 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 DLL3Q9NYJ7 618 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 PSENENQ9NZ42 101 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 GON4LQ3T8J9 2241 aa4.91□□□□□ -1.62
VPS41-214ENST00000490924 A0A1B0GWJ7 208 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 MAP1LC3B2A6NCE7 125 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 FNDC10F2Z333 226 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 C17orf112F2Z3M2 114 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 F6UZH7 168 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 IFNL4K9M1U5 179 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 ITGB1BP1O14713 200 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 RAB29O14966 203 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 HMGB3O15347 200 aaKnown RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 CYB5BO43169 146 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 TNFSF15O95150 251 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 NXPH2O95156 264 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 HRASP01112 189 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 IGLV2-14P01704 120 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 CXCL1P09341 107 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 PGA5P0DJD9 388 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 TDGF1P13385 188 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 DAOP14920 347 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 COX5AP20674 150 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 GPM6AP51674 278 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 CLDN18P56856 261 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 RPS18P62269 152 aaKnown RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 RAB11AP62491 216 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 GNB2P62879 340 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 RPP30P78346 268 aaKnown RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 ARF1P84077 181 aaKnown RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 TNFRSF9Q07011 255 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 SLC38A11Q08AI6 406 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 FOXL1Q12952 345 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 ZNF154Q13106 437 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 EIF4EBP1Q13541 118 aaPredicted RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 BSXQ3C1V8 233 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 AKIRIN2Q53H80 203 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 DCAF12Q5T6F0 453 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 NCR3LG1Q68D85 454 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 SLC35E4Q6ICL7 350 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 ZNF600Q6ZNG1 722 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 FAM90A1Q86YD7 464 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 C1orf210Q8IVY1 113 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 LILRB2Q8N423 598 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 NUDT10Q8NFP7 164 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 TMEM170AQ8WVE7 144 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 DYRK2Q92630 601 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 APH1AQ96BI3 265 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 NUDT11Q96G61 164 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 AJUBAQ96IF1 538 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 OR5B12Q96R08 314 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 C2orf88Q9BSF0 95 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 SPRY4Q9C004 299 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 MAP1LC3BQ9GZQ8 125 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 FGF23Q9GZV9 251 aaPredicted RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 PARP12Q9H0J9 701 aaKnown RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 MEGF9Q9H1U4 602 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 HES4Q9HCC6 221 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.9□□□□□ -1.63
VPS41-214ENST00000490924 SLC39A9Q9NUM3 307 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 ZNF581Q9P0T4 197 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 LRFN1Q9P244 771 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 GNG13Q9P2W3 67 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 CACNG5Q9UF02 275 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 PRSS50Q9UI38 385 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 LY96Q9Y6Y9 160 aa4.9□□□□□ -1.63
VPS41-214ENST00000490924 MYO15AQ9UKN7 3530 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 KIAA1549Q9HCM3 1950 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 TMEM30CPA0ZSE6 113 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 C5orf49A4QMS7 147 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ARGFXA6NJG6 315 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ZNF727A8MUV8 499 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 H7BYZ3 331 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 SH2D1BO14796 132 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 ZNF737O75373 536 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 YIF1AO95070 293 aa4.89□□□□□ -1.63
VPS41-214ENST00000490924 CLDN14O95500 239 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms