RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 TMED9Q9BVK6 235 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 C11orf54Q9H0W9 315 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 LPAR5Q9H1C0 372 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 WASHC3Q9Y3C0 194 aa12.77□□□□□ -0.37
SRGAP3-209ENST00000490889 ITGB1BP1O14713 200 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 SOCS1O15524 211 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 CA2P00918 260 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 HSPB1P04792 205 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 OR8U9P0C7N5 309 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 MC5RP33032 325 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 TPPP2P59282 170 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 HLA-DRB3P79483 266 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 TMEM267Q0VDI3 215 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 PSG5Q15238 335 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 AKIRIN2Q53H80 203 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 PHYHIPQ92561 330 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 GHITMQ9H3K2 345 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 C8orf4Q9NR00 106 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 AK3Q9UIJ7 227 aa12.76□□□□□ -0.37
SRGAP3-209ENST00000490889 TRBV6-6A0A0A6YYG2 114 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 FOXI3A8MTJ6 420 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 RBBP9O75884 186 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 IGKV1-16P04430 117 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 SCTP09683 121 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 CEACAM6P40199 344 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 SSBP2P81877 361 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 PITPNAQ00169 270 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 PYHIN1Q6K0P9 492 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 ZNF562Q6V9R5 426 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 MOB1BQ7L9L4 216 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 Q8N1Y9 231 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 MS4A15Q8N5U1 240 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 ZNF383Q8NA42 475 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 GFI1Q99684 422 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 RNF150Q9ULK6 438 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 LSM2Q9Y333 95 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 LYSTQ99698 3801 aa12.75□□□□□ -0.37
SRGAP3-209ENST00000490889 IGKV1-6A0A0C4DH72 117 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 ARPC1BO15143 372 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 CDK1P06493 297 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 SRMP19623 302 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 RCN1Q15293 331 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 HSD17B12Q53GQ0 312 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 CEACAM19Q7Z692 300 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 FLYWCH2Q96CP2 140 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 OR4C12Q96R67 309 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 RNF5Q99942 180 aa12.74□□□□□ -0.37
SRGAP3-209ENST00000490889 EBAG9O00559 213 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 BPNT1O95861 308 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 TRGV3P03979 118 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 UCHL1P09936 223 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 ZBTB25P24278 435 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 TMEM50BP56557 158 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 P2RY14Q15391 338 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 RNLSQ5VYX0 342 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 FAM89BQ8N5H3 189 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 GRPEL2Q8TAA5 225 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 EDARADDQ8WWZ3 215 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 PTX4Q96A99 478 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 TM2D3Q9BRN9 247 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 MND1Q9BWT6 205 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 SLA2Q9H6Q3 261 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 ZMAT4Q9H898 229 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 Q9N2K0 584 aa12.73□□□□□ -0.37
SRGAP3-209ENST00000490889 HSPA12AO43301 675 aa12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 SLC25A17O43808 307 aa12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 TFAP2AP05549 437 aa12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 LYL1P12980 280 aa12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 CPEP16870 476 aa12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 OGFRL1Q5TC84 451 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 CITED4Q96RK1 184 aa12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 RIMS4Q9H426 269 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-209ENST00000490889 SPDEFO95238 335 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 RPS16P62249 146 aaKnown RBP12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 DEFA5Q01523 94 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 PJVKQ0ZLH3 352 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 FXYD3Q14802 87 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 SPHARQ15513 63 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 TMEM91Q6ZNR0 172 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 POC5Q8NA72 575 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 OR5T1Q8NG75 326 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 TMEM203Q969S6 136 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 ARHGAP5-AS1Q96IT6 56 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 TSNAXQ99598 290 aaKnown RBP12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 C12orf4Q9NQ89 552 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 HSF4Q9ULV5 492 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 STUB1Q9UNE7 303 aa12.71□□□□□ -0.37
SRGAP3-209ENST00000490889 PTGES3LE9PB15 166 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 SLC17A2O00624 439 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 IGLV2-23P01705 113 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 ARSBP15848 533 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms