RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 PSG5Q15238 335 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 UNQ5815/PRO19632Q6UWF5 114 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 OVCH2Q7RTZ1 564 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 OR6M1Q8NGM8 313 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 SETD6Q8TBK2 473 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 RHOVQ96L33 236 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 MND1Q9BWT6 205 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 PARP12Q9H0J9 701 aaKnown RBP12.07□□□□□ -0.48
NUP58-213ENST00000490231 ZMAT4Q9H898 229 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 METTL1Q9UBP6 276 aaKnown RBP12.07□□□□□ -0.48
NUP58-213ENST00000490231 MGAT4AQ9UM21 535 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 GAB2Q9UQC2 676 aa12.07□□□□□ -0.48
NUP58-213ENST00000490231 A0A0A6YYD4 124 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 SPDEFO95238 335 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 TFAP2AP05549 437 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 CEACAM6P40199 344 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 HSD17B12Q53GQ0 312 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 LFNGQ8NES3 379 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 PTX4Q96A99 478 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 FAM103A1Q9BTL3 118 aaKnown RBP12.06□□□□□ -0.48
NUP58-213ENST00000490231 TMED9Q9BVK6 235 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 C11orf54Q9H0W9 315 aaPredicted RBP12.06□□□□□ -0.48
NUP58-213ENST00000490231 LPAR5Q9H1C0 372 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 KCNK15Q9H427 330 aa12.06□□□□□ -0.48
NUP58-213ENST00000490231 TRIM64CA6NLI5 447 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 PROP1O75360 226 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 CA2P00918 260 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 CDK1P06493 297 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 UCHL1P09936 223 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 CPEP16870 476 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 TPPP2P59282 170 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 CEACAM19Q7Z692 300 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 FAM89BQ8N5H3 189 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 CLCC1Q96S66 551 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 TSNAXQ99598 290 aaKnown RBP12.05□□□□□ -0.48
NUP58-213ENST00000490231 URM1Q9BTM9 101 aaKnown RBP12.05□□□□□ -0.48
NUP58-213ENST00000490231 ELOVL1Q9BW60 279 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 OR1A1Q9P1Q5 309 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 AK3Q9UIJ7 227 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 HSF4Q9ULV5 492 aa12.05□□□□□ -0.48
NUP58-213ENST00000490231 FOXI3A8MTJ6 420 aaPredicted RBP12.04□□□□□ -0.48
NUP58-213ENST00000490231 SOCS1O15524 211 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 HSPA12AO43301 675 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 IGKV1-16P04430 117 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 RCN1Q15293 331 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 SPHARQ15513 63 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 OGFRL1Q5TC84 451 aaPredicted RBP12.04□□□□□ -0.48
NUP58-213ENST00000490231 HDHD3Q9BSH5 251 aaPredicted RBP12.04□□□□□ -0.48
NUP58-213ENST00000490231 Q9N2K0 584 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 C12orf4Q9NQ89 552 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 STUB1Q9UNE7 303 aa12.04□□□□□ -0.48
NUP58-213ENST00000490231 LSM2Q9Y333 95 aaKnown RBP12.04□□□□□ -0.48
NUP58-213ENST00000490231 H3BUA1 57 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 IGLV1-51P01701 117 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 TRGV3P03979 118 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 SCTP09683 121 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 ARSBP15848 533 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 RPS16P62249 146 aaKnown RBP12.03□□□□□ -0.48
NUP58-213ENST00000490231 PDPNQ86YL7 162 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 ZNF383Q8NA42 475 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 DRAXINQ8NBI3 349 aaPredicted RBP12.03□□□□□ -0.48
NUP58-213ENST00000490231 CITED4Q96RK1 184 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 TM2D3Q9BRN9 247 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 RANGRFQ9HD47 186 aaPredicted RBP12.03□□□□□ -0.48
NUP58-213ENST00000490231 ZNF221Q9UK13 617 aa12.03□□□□□ -0.48
NUP58-213ENST00000490231 DNAH7Q8WXX0 4024 aa12.02□□□□□ -0.48
NUP58-213ENST00000490231 A8MZ25 164 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 SLC17A2O00624 439 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 CASQ2O14958 399 aaPredicted RBP12.02□□□□□ -0.49
NUP58-213ENST00000490231 APOA2P02652 100 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 LYL1P12980 280 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 ZP3P21754 424 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 TMEM50BP56557 158 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 FXYD3Q14802 87 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
NUP58-213ENST00000490231 Q8N1Y9 231 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 POC5Q8NA72 575 aa12.02□□□□□ -0.49
NUP58-213ENST00000490231 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.02□□□□□ -0.49
NUP58-213ENST00000490231 IGKV1-6A0A0C4DH72 117 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 A0A0G2JLM5 398 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 PTGES3LE9PB15 166 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 LDLRAD4O15165 306 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 SLC25A17O43808 307 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 IGHV4-30-4P0DP06 118 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 SNRPBP14678 240 aaKnown RBP12.01□□□□□ -0.49
NUP58-213ENST00000490231 LINC00205P59089 165 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 P2RY14Q15391 338 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 MED22Q15528 200 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 MOGAT2Q3SYC2 334 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 ANKRD13BQ86YJ7 626 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 GRPEL2Q8TAA5 225 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 UFD1Q92890 307 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 GFI1Q99684 422 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 CMSS1Q9BQ75 279 aaKnown RBP12.01□□□□□ -0.49
NUP58-213ENST00000490231 PLGRKTQ9HBL7 147 aa12.01□□□□□ -0.49
NUP58-213ENST00000490231 PALMDQ9NP74 551 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms