RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 RAB4AP20338 218 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 MDKP21741 143 aaPredicted RBP6.3□□□□□ -1.4
SSR1-210ENST00000489567 ZNF137PP52743 207 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 TMBIM6P55061 237 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 AWAT1Q58HT5 328 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 SAPCD1Q5SSQ6 148 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 Q6ZSV7 163 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 LYG1Q8N1E2 194 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 DRAM1Q8N682 238 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 OR56B4Q8NH76 319 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 RAB2BQ8WUD1 216 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 CREB3L1Q96BA8 519 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 ABHD14AQ9BUJ0 271 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 ST6GALNAC5Q9BVH7 336 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 IFI27L2Q9H2X8 130 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 ABCB10Q9NRK6 738 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 CEPT1Q9Y6K0 416 aa6.3□□□□□ -1.4
SSR1-210ENST00000489567 A0A0A6YYH2 397 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 IGHV3-72A0A0B4J1Y9 119 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 IGHV1-3A0A0C4DH29 117 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 A6NJ64 397 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 FAM90A9PA6NNJ1 464 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 OOSP1A8MZH6 123 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 ZNF736B4DX44 427 aaPredicted RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 H3BMQ9 156 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 LCE2BO14633 110 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 XRCC3O43542 346 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 FCER2P06734 321 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 ELK1P19419 428 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 DTYMKP23919 212 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 CEACAM6P40199 344 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 OR3A3P47888 321 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 HOXA1P49639 335 aaPredicted RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 COMPP49747 757 aaPredicted RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 ZNF816Q0VGE8 651 aaPredicted RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 LY6G6FQ5SQ64 297 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 STEAP3Q658P3 488 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 DHRS7BQ6IAN0 325 aaPredicted RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 Q6ZS46 218 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 GVQW1Q8N7I0 195 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 OR4A4PQ8NGN8 299 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 DYNC2LI1Q8TCX1 351 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 RTN4IP1Q8WWV3 396 aaPredicted RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 PHF21AQ96BD5 680 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 ISOC1Q96CN7 298 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 S100A16Q96FQ6 103 aaKnown RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 ABHD14BQ96IU4 210 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 AGMATQ9BSE5 352 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 CABLES2Q9BTV7 478 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 C11orf54Q9H0W9 315 aaPredicted RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 RBM38Q9H0Z9 239 aaKnown RBP6.29□□□□□ -1.4
SSR1-210ENST00000489567 AUNIPQ9H7T9 357 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 MGAT4AQ9UM21 535 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 DNHD1Q96M86 4753 aa6.29□□□□□ -1.4
SSR1-210ENST00000489567 SAA2-SAA4A0A096LPE2 208 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 MEIS3P1A6NDR6 274 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 HSPA12AO43301 675 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 PROP1O75360 226 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 GAPDHP04406 335 aaKnown RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 CRYBA1P05813 215 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 SNRNP70P08621 437 aaKnown RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 SAA2P0DJI9 122 aaPredicted RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 ZNF182P17025 639 aaPredicted RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 ZBTB25P24278 435 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RCVRNP35243 200 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RAB7AP51149 207 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 NKX2-5P52952 324 aaPredicted RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 RAG2P55895 527 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 TAS2R20P59543 309 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RPL15P61313 204 aaKnown RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 HABP2Q14520 560 aaPredicted RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 ARL6IP1Q15041 203 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 SRSF7Q16629 238 aaKnown RBP eCLIP6.28□□□□□ -1.42e-7■□□□□ 10.5
SSR1-210ENST00000489567 PNLIPRP3Q17RR3 467 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 CCDC144NLQ6NUI1 221 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 Q6ZS49 121 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 MOB3BQ86TA1 216 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 OR8H3Q8N146 312 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 CENPSQ8N2Z9 138 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 SLC24A4Q8NFF2 622 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 OR2AK2Q8NG84 335 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 SPATA3Q8NHX4 192 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 ZNF486Q96H40 463 aaPredicted RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 ZNF251Q9BRH9 671 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RDH8Q9NYR8 311 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RNF150Q9ULK6 438 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 SIGLEC9Q9Y336 463 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 TRBV6-7A0A0A0MS04 114 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 WRBO00258 174 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RGS11O94810 467 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 NDUFA7O95182 113 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 HLA-DQB1P01920 261 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 APOA1P02647 267 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 AMY1AP04745 511 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 AMY2AP04746 511 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 BRS3P32247 399 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 BMI1P35226 326 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 MNDAP41218 407 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 KIR2DS4P43632 304 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 BLCAPP62952 87 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms