RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TINAGL1Q9GZM7 467 aaPredicted RBP8.55□□□□□ -1.04
SCAMP4-208ENST00000489554 MEGF9Q9H1U4 602 aa8.55□□□□□ -1.04
SCAMP4-208ENST00000489554 ZNF286AQ9HBT8 521 aa8.55□□□□□ -1.04
SCAMP4-208ENST00000489554 CALYQ9NYX4 217 aa8.55□□□□□ -1.04
SCAMP4-208ENST00000489554 OR6C3Q9NZP0 311 aa8.55□□□□□ -1.04
SCAMP4-208ENST00000489554 TRAPPC2LQ9UL33 140 aa8.55□□□□□ -1.04
SCAMP4-208ENST00000489554 UBE2J1Q9Y385 318 aaPredicted RBP8.55□□□□□ -1.04
SCAMP4-208ENST00000489554 TRGV10A0A0A0MS01 117 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 TRBV6-7A0A0A0MS04 114 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 KBTBD11-OT1A0A1B0GTJ5 212 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 ZNF729A6NN14 1252 aaPredicted RBP8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 M0QYG6 137 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 RLN1P04808 185 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 SULT1A3P0DMM9 295 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 SULT1A4P0DMN0 295 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 COX7A1P24310 79 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 HRH1P35367 487 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 LOXL3P58215 753 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 LRRC75BQ2VPJ9 315 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 C6orf183Q5T699 404 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 ZNF626Q68DY1 528 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 IDO2Q6ZQW0 420 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 OVCH2Q7RTZ1 564 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 OR5AP2Q8NGF4 316 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 OR4A4PQ8NGN8 299 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 OR5H2Q8NGV7 314 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 LINC01006Q8NI28 216 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 RFESDQ8TAC1 157 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 KIRREL1Q96J84 757 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 ZNF714Q96N38 554 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 SSX3Q99909 188 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 TOLLIPQ9H0E2 274 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 PARP12Q9H0J9 701 aaKnown RBP8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 C16orf95Q9H693 158 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 RANGRFQ9HD47 186 aaPredicted RBP8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 TAS2R3Q9NYW6 316 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 OR1A1Q9P1Q5 309 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
SCAMP4-208ENST00000489554 H3BUX3 64 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 SDCBPO00560 298 aaPredicted RBP8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 TUSC2O75896 110 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 TSPAN9O75954 239 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 RGS11O94810 467 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 DIRAS3O95661 229 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 PMP2P02689 132 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 IGHV1-8P0DP01 117 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 GZMHP20718 246 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 KIR2DS4P43632 304 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 RAP2BP61225 183 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 TSPAN5P62079 268 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 GNMTQ14749 295 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 KIR2DS1Q14954 304 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 SURF2Q15527 256 aaPredicted RBP8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 NDUFA5Q16718 116 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 PRAMEF5Q5TYX0 476 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 LIN54Q6MZP7 749 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 LPCAT3Q6P1A2 487 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 TRAT1Q6PIZ9 186 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 HEPN1Q6WQI6 88 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 Q6ZSV7 163 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 OR52L2PQ8NGH6 319 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 C17orf50Q8WW18 174 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 ARL11Q969Q4 196 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 AJUBAQ96IF1 538 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 CITED1Q99966 193 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 RAB18Q9NP72 206 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 MGAT4AQ9UM21 535 aa8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 TBL2Q9Y4P3 447 aaKnown RBP8.53□□□□□ -1.04
SCAMP4-208ENST00000489554 ODF3BA8MYP8 253 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 ARG1P05089 322 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 GIPP09681 153 aaPredicted RBP8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 PROK1P58294 105 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 HTD2P86397 168 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 FCN2Q15485 313 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 SCGB2B2Q4G0G5 96 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 C4orf46Q504U0 113 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 LHFPL1Q86WI0 220 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 H1FOOQ8IZA3 346 aaPredicted RBP8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 PRR18Q8N4B5 295 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 ZNF565Q8N9K5 539 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 ZNF439Q8NDP4 499 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 OR11H6Q8NGC7 330 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 TERB2Q8NHR7 220 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 ZNF431Q8TF32 576 aaPredicted RBP8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 MALSU1Q96EH3 234 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 GON7Q9BXV9 100 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 ZNF436Q9C0F3 470 aaPredicted RBP8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 SLA2Q9H6Q3 261 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 IDI2-AS1Q9NZ38 188 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 SESN1Q9Y6P5 492 aa8.52□□□□□ -1.05
SCAMP4-208ENST00000489554 A0A087X0M5 115 aa8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 IGHV3-43A0A0B4J1X8 118 aa8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 A0A1B0GX30 115 aa8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 TIMM23O14925 209 aa8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 BET1O15155 118 aa8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 OR5H8P0DN80 308 aa8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 IGHV3-43DP0DP04 118 aa8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 PPP1CCP36873 323 aaKnown RBP8.51□□□□□ -1.05
SCAMP4-208ENST00000489554 CD300CQ08708 224 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms