RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CLN6Q9NWW5 311 aa10.87□□□□□ -0.67
UFD1-209ENST00000489406 MDFICQ9P1T7 246 aa10.87□□□□□ -0.67
UFD1-209ENST00000489406 SAMHD1Q9Y3Z3 626 aaKnown RBP10.87□□□□□ -0.67
UFD1-209ENST00000489406 IGHV4-28A0A0C4DH34 117 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 METTL15A6NJ78 407 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 A8MWP6 167 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 SNX3O60493 162 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
UFD1-209ENST00000489406 SPDEFO95238 335 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 OR9G9P0C7N8 305 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 COX4I1P13073 169 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 PSME3P61289 254 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 MED21Q13503 144 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 TMEM187Q14656 261 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 FAM106AQ4KMX7 169 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 ZNF585BQ52M93 769 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 BCDIN3DQ7Z5W3 292 aaKnown RBP10.86□□□□□ -0.67
UFD1-209ENST00000489406 SYT8Q8NBV8 401 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 TNFAIP8L1Q8WVP5 186 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 ZNF503Q96F45 646 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 IFI27L2Q9H2X8 130 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 TAF9BQ9HBM6 251 aa10.86□□□□□ -0.67
UFD1-209ENST00000489406 CPEP16870 476 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 KRTAP10-2P60368 255 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 OR4A47Q6IF82 309 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 OR2AK2Q8NG84 335 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 OR5AN1Q8NGI8 311 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 OR51A4Q8NGJ6 313 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 ASB9Q96DX5 294 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 FAM192AQ9GZU8 254 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 REEP1Q9H902 201 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 EFCAB1Q9HAE3 211 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 TVP23BQ9NYZ1 205 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 JPT1Q9UK76 154 aa10.85□□□□□ -0.67
UFD1-209ENST00000489406 GABRPO00591 440 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 YPEL1O60688 119 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 CA1P00915 261 aaPredicted RBP10.84□□□□□ -0.67
UFD1-209ENST00000489406 IGKV1-16P04430 117 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 RBM11P57052 281 aaKnown RBP10.84□□□□□ -0.67
UFD1-209ENST00000489406 SLC25A30Q5SVS4 291 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 FAM71F2Q6NXP2 309 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 SETD9Q8NE22 299 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 OR13C3Q8NGS6 347 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 OR52N1Q8NH53 320 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 YPEL2Q96QA6 119 aa10.84□□□□□ -0.67
UFD1-209ENST00000489406 EXOSC1Q9Y3B2 195 aaKnown RBP10.84□□□□□ -0.67
UFD1-209ENST00000489406 V9GYY5 206 aaPredicted RBP10.84□□□□□ -0.67
UFD1-209ENST00000489406 TRBV9A0A0B4J1U6 114 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 TSPAN4O14817 238 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 CDRT1O95170 752 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 IGHV3-23P01764 117 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 C8orf88P0DMB2 117 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 EPHA2P29317 976 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 ARL3P36405 182 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 C15orf32Q32M92 178 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 DMKNQ6E0U4 476 aaPredicted RBP10.83□□□□□ -0.68
UFD1-209ENST00000489406 TRAT1Q6PIZ9 186 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 HACD2Q6Y1H2 254 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 DRAXINQ8NBI3 349 aaPredicted RBP10.83□□□□□ -0.68
UFD1-209ENST00000489406 GPER1Q99527 375 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 SULT4A1Q9BR01 284 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 C5orf66Q9H5L9 145 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 PIPOXQ9P0Z9 390 aa10.83□□□□□ -0.68
UFD1-209ENST00000489406 ELOA3CA0A087WX78 387 aaPredicted RBP10.82□□□□□ -0.68
UFD1-209ENST00000489406 A0A1W2PQL4 384 aaPredicted RBP10.82□□□□□ -0.68
UFD1-209ENST00000489406 FAM90A7PA6NKC0 464 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 RAB29O14966 203 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 ARPC2O15144 300 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 MPPED1O15442 326 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 OR2J3O76001 311 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 MAS1P04201 325 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 C12orf74Q32Q52 190 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 RNF212Q495C1 297 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 CLEC19AQ6UXS0 136 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 NECAP1Q8NC96 275 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 GIPC3Q8TF64 312 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 MARC2Q969Z3 335 aa10.82□□□□□ -0.68
UFD1-209ENST00000489406 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
UFD1-209ENST00000489406 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 OR4C46A6NHA9 309 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 SULT1C4O75897 302 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 ISG15P05161 165 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 OSMP13725 252 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 XGP55808 180 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 NHLRC3Q5JS37 347 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 FAM209BQ5JX69 171 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 OR2T5Q6IEZ7 315 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 UNQ9165/PRO28630Q6UXU0 137 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 OR2G2Q8NGZ5 317 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 OR2T29Q8NH02 315 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 ABHD14BQ96IU4 210 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 TEX12Q9BXU0 123 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 KCNIP1Q9NZI2 227 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 GNG8Q9UK08 70 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 CELA1Q9UNI1 258 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 PLA2G2DQ9UNK4 145 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 S4R3C0 116 aa10.81□□□□□ -0.68
UFD1-209ENST00000489406 MCRIP1C9JLW8 97 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms