RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 OR8H3Q8N146 312 aa8.32□□□□□ -1.08
SKA1-204ENST00000488454 BORCS5Q969J3 196 aa8.32□□□□□ -1.08
SKA1-204ENST00000488454 SSX3Q99909 188 aa8.32□□□□□ -1.08
SKA1-204ENST00000488454 PARP12Q9H0J9 701 aaKnown RBP8.32□□□□□ -1.08
SKA1-204ENST00000488454 OR2D2Q9H210 308 aa8.32□□□□□ -1.08
SKA1-204ENST00000488454 IFI27L2Q9H2X8 130 aa8.32□□□□□ -1.08
SKA1-204ENST00000488454 GAB2Q9UQC2 676 aa8.32□□□□□ -1.08
SKA1-204ENST00000488454 DSCAML1Q8TD84 2053 aa8.32□□□□□ -1.08
SKA1-204ENST00000488454 SONP18583 2426 aaKnown RBP8.31□□□□□ -1.08
SKA1-204ENST00000488454 A0A0A6YYJ9 748 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 MDFIC2A0A1B0GVS7 189 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 ANKRD20A5PA0PJZ0 165 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 TCF21O43680 179 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 LANCL1O43813 399 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 FBXO24O75426 580 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 TUSC2O75896 110 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 PPYP01298 95 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 CD74P04233 296 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 AMY2AP04746 511 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 REG1BP48304 166 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 ZNF137PP52743 207 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 PPP5CP53041 499 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 ZNF816Q0VGE8 651 aaPredicted RBP8.31□□□□□ -1.08
SKA1-204ENST00000488454 AANATQ16613 207 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 LRRC75BQ2VPJ9 315 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 LDLRAD2Q5SZI1 272 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 FAM71F2Q6NXP2 309 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 LPCAT3Q6P1A2 487 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 ARRDC1Q8N5I2 433 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.31□□□□□ -1.08
SKA1-204ENST00000488454 OR5R1Q8NH85 324 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 SECTM1Q8WVN6 248 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 SSMEM1Q8WWF3 244 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 CAPSLQ8WWF8 208 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 RTN4IP1Q8WWV3 396 aaPredicted RBP8.31□□□□□ -1.08
SKA1-204ENST00000488454 ST6GALNAC6Q969X2 333 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 ZNF48Q96MX3 618 aaPredicted RBP8.31□□□□□ -1.08
SKA1-204ENST00000488454 AGMATQ9BSE5 352 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 TINAGL1Q9GZM7 467 aaPredicted RBP8.31□□□□□ -1.08
SKA1-204ENST00000488454 SLC5A7Q9GZV3 580 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 PRDM13Q9H4Q3 707 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 AKIP1Q9NQ31 210 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 TNFRSF19Q9NS68 423 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 MCUBQ9NWR8 336 aa8.31□□□□□ -1.08
SKA1-204ENST00000488454 SAA2-SAA4A0A096LPE2 208 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 IGHV1-3A0A0C4DH29 117 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 CENPXA8MT69 81 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 VGLL3A8MV65 326 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 M0R1X1 148 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
SKA1-204ENST00000488454 FAM106CPP0CH98 169 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 SAA2P0DJI9 122 aaPredicted RBP8.3□□□□□ -1.08
SKA1-204ENST00000488454 PAX6P26367 422 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 S100GP29377 79 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 CD40LGP29965 261 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 DYNLT3P51808 116 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 BAK1Q16611 211 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 SCGB2B2Q4G0G5 96 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 RPL39P5Q59GN2 51 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 ZNF833PQ6ZTB9 187 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 LDLRAD3Q86YD5 345 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 ODF3L1Q8IXM7 274 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 DYNAPQ8N1N2 210 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 MFSD4AQ8N468 514 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 TMEM86BQ8N661 226 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 ZNF645Q8N7E2 425 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 DEDD2Q8WXF8 326 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 AJUBAQ96IF1 538 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 CCDC32Q9BV29 185 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 SCP2D1Q9UJQ7 156 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 PITPNC1Q9UKF7 332 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 POMT1Q9Y6A1 747 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 NAV3Q8IVL0 2385 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 SVEP1Q4LDE5 3571 aa8.3□□□□□ -1.08
SKA1-204ENST00000488454 H3BUX3 64 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 TIMM23O14925 209 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 IGHV4-59P01825 116 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 PGAM2P15259 253 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 MC5RP33032 325 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 IER3P46695 156 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 RAB13P51153 203 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 ID3Q02535 119 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 DIAPH2-AS1Q14236 149 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 HES1Q14469 280 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 CMTM1Q8IZ96 169 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 DRAM1Q8N682 238 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 ZBTB34Q8NCN2 500 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 OR4C16Q8NGL9 310 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 OR56B4Q8NH76 319 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 TERB2Q8NHR7 220 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 TRIM63Q969Q1 353 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 MOB3AQ96BX8 217 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 ADTRPQ96IZ2 230 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 AKR1E2Q96JD6 320 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 PRRT1Q99946 306 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 SDHAF2Q9NX18 166 aa8.29□□□□□ -1.08
SKA1-204ENST00000488454 IGHV3-72A0A0B4J1Y9 119 aa8.28□□□□□ -1.08
SKA1-204ENST00000488454 IGKV1D-13A0A0B4J2D9 117 aa8.28□□□□□ -1.08
SKA1-204ENST00000488454 LINC00854A0A1B0GVQ3 168 aa8.28□□□□□ -1.08
SKA1-204ENST00000488454 A0A1W2PPI3 338 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms