RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 RUNX1Q01196 453 aa15.02■□□□□ -0
CD55-209ENST00000488171 TBCEQ15813 527 aaPredicted RBP15.02■□□□□ -0
CD55-209ENST00000488171 SSX1Q16384 188 aa15.02■□□□□ -0
CD55-209ENST00000488171 IZUMO2Q6UXV1 221 aa15.02■□□□□ -0
CD55-209ENST00000488171 OR56B1Q8NGI3 324 aa15.02■□□□□ -0
CD55-209ENST00000488171 EDARADDQ8WWZ3 215 aa15.02■□□□□ -0
CD55-209ENST00000488171 CMSS1Q9BQ75 279 aaKnown RBP15.02■□□□□ -0
CD55-209ENST00000488171 VSIG4Q9Y279 399 aa15.02■□□□□ -0
CD55-209ENST00000488171 WASHC3Q9Y3C0 194 aa15.02■□□□□ -0
CD55-209ENST00000488171 DENRO43583 198 aaKnown RBP15.01□□□□□ -0.01
CD55-209ENST00000488171 SOX15O60248 233 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 EGR2P11161 476 aaPredicted RBP15.01□□□□□ -0.01
CD55-209ENST00000488171 GNB1P62873 340 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 CX3CL1P78423 397 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 CD69Q07108 199 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 HES5Q5TA89 166 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 ZNF660Q6AZW8 331 aaPredicted RBP15.01□□□□□ -0.01
CD55-209ENST00000488171 OR1N2Q8NGR9 330 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 CNBD2Q96M20 576 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 OR5B12Q96R08 314 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 VCX3BQ9H321 246 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 RNF150Q9ULK6 438 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 KCNK7Q9Y2U2 307 aa15.01□□□□□ -0.01
CD55-209ENST00000488171 SHISA3A0PJX4 238 aa15□□□□□ -0.01
CD55-209ENST00000488171 H7C2Y5 167 aa15□□□□□ -0.01
CD55-209ENST00000488171 RBBP9O75884 186 aa15□□□□□ -0.01
CD55-209ENST00000488171 GSTP1P09211 210 aaKnown RBP15□□□□□ -0.01
CD55-209ENST00000488171 SNRPBP14678 240 aaKnown RBP15□□□□□ -0.01
CD55-209ENST00000488171 LINC00205P59089 165 aa15□□□□□ -0.01
CD55-209ENST00000488171 ECSCRQ19T08 205 aa15□□□□□ -0.01
CD55-209ENST00000488171 ZNF367Q7RTV3 350 aa15□□□□□ -0.01
CD55-209ENST00000488171 DRAXINQ8NBI3 349 aaPredicted RBP15□□□□□ -0.01
CD55-209ENST00000488171 A0A1W2PN81 502 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 TRDCB7Z8K6 153 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 OR8U8P0C7N1 319 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 CHRNA7P36544 502 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 HSPA13P48723 471 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 PSMD7P51665 324 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 OR10A3P58181 314 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 ZNF616Q08AN1 781 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 DCTN2Q13561 401 aaKnown RBP14.99□□□□□ -0.01
CD55-209ENST00000488171 PLGLAQ15195 96 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 MOGAT2Q3SYC2 334 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 ZNF383Q8NA42 475 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 RNF5Q99942 180 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 RDH8Q9NYR8 311 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 RAB22AQ9UL26 194 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 GAB2Q9UQC2 676 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 NUBP2Q9Y5Y2 271 aa14.99□□□□□ -0.01
CD55-209ENST00000488171 TRAV1-2A0A0B4J238 106 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 IGKV1-16P04430 117 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 RANBP1P43487 201 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 PSG5Q15238 335 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 ZNF260Q3ZCT1 412 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 CD200R1LQ6Q8B3 271 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 CASTOR1Q8WTX7 329 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 PRR25Q96S07 402 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 TOLLIPQ9H0E2 274 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 NDUFB11Q9NX14 153 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 METTL1Q9UBP6 276 aaKnown RBP14.98□□□□□ -0.01
CD55-209ENST00000488171 ZNF221Q9UK13 617 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 FOXA2Q9Y261 457 aaPredicted RBP14.98□□□□□ -0.01
CD55-209ENST00000488171 LSM4Q9Y4Z0 139 aaKnown RBP14.98□□□□□ -0.01
CD55-209ENST00000488171 A3GALT2U3KPV4 340 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 ECI1P42126 302 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 TCTEX1D1Q8N7M0 179 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 OR4A4PQ8NGN8 299 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 RAB3CQ96E17 227 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 CLCC1Q96S66 551 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 ALX4Q9H161 411 aaPredicted RBP14.98□□□□□ -0.01
CD55-209ENST00000488171 BLOC1S6Q9UL45 172 aa14.98□□□□□ -0.01
CD55-209ENST00000488171 IFITM5A6NNB3 132 aa14.97□□□□□ -0.01
CD55-209ENST00000488171 PDCD5O14737 125 aa14.97□□□□□ -0.01
CD55-209ENST00000488171 FABP7O15540 132 aa14.97□□□□□ -0.01
CD55-209ENST00000488171 TFAP2AP05549 437 aa14.97□□□□□ -0.01
CD55-209ENST00000488171 FCGR3AP08637 254 aa14.97□□□□□ -0.01
CD55-209ENST00000488171 CD3GP09693 182 aa14.97□□□□□ -0.01
CD55-209ENST00000488171 FAM103A1Q9BTL3 118 aaKnown RBP14.97□□□□□ -0.01
CD55-209ENST00000488171 TRDV1A0A1B0GX56 115 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 RAB27BO00194 218 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 MFNGO00587 321 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 SPDEFO95238 335 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 CA2P00918 260 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 GNB3P16520 340 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 SERPINB10P48595 397 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 TMEM267Q0VDI3 215 aaPredicted RBP14.96□□□□□ -0.02
CD55-209ENST00000488171 IGSF11Q5DX21 431 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 ZNF562Q6V9R5 426 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 PPP1R27Q86WC6 154 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 PDPNQ86YL7 162 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.96□□□□□ -0.02
CD55-209ENST00000488171 OR10R2Q8NGX6 335 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 ABHD5Q8WTS1 349 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 DCUN1D4Q92564 292 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 TSNAXQ99598 290 aaKnown RBP14.96□□□□□ -0.02
CD55-209ENST00000488171 CABLES2Q9BTV7 478 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 TPSG1Q9NRR2 321 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 RAB26Q9ULW5 256 aa14.96□□□□□ -0.02
CD55-209ENST00000488171 A0A0B4J203 849 aa14.95□□□□□ -0.02
CD55-209ENST00000488171 M0R1X1 148 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms