RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 C5orf64Q2M2E5 130 aa18.64■□□□□ 0.57
RNF38-208ENST00000488058 CDNFQ49AH0 187 aa18.64■□□□□ 0.57
RNF38-208ENST00000488058 CXorf66Q5JRM2 361 aaPredicted RBP18.64■□□□□ 0.57
RNF38-208ENST00000488058 LCNL1Q6ZST4 164 aa18.64■□□□□ 0.57
RNF38-208ENST00000488058 CABLES2Q9BTV7 478 aa18.64■□□□□ 0.57
RNF38-208ENST00000488058 CENPOQ9BU64 300 aa18.64■□□□□ 0.57
RNF38-208ENST00000488058 PARP11Q9NR21 331 aa18.64■□□□□ 0.57
RNF38-208ENST00000488058 NOTCH1P46531 2555 aa18.64■□□□□ 0.57
RNF38-208ENST00000488058 RPLP1P05386 114 aaKnown RBP18.63■□□□□ 0.57
RNF38-208ENST00000488058 MC5RP33032 325 aa18.63■□□□□ 0.57
RNF38-208ENST00000488058 PLGLAQ15195 96 aa18.63■□□□□ 0.57
RNF38-208ENST00000488058 LIN54Q6MZP7 749 aa18.63■□□□□ 0.57
RNF38-208ENST00000488058 GINS4Q9BRT9 223 aa18.63■□□□□ 0.57
RNF38-208ENST00000488058 FBXL15Q9H469 300 aa18.63■□□□□ 0.57
RNF38-208ENST00000488058 M0R1X1 148 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 ATP6V0E1O15342 81 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 HLA-DRB1P01911 266 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 OR8U9P0C7N5 309 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 IDNKQ5T6J7 187 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 NPBQ8NG41 125 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 OR8U1Q8NH10 309 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 OR2D2Q9H210 308 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 VCX3AQ9NNX9 186 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 RBM7Q9Y580 266 aaKnown RBP18.62■□□□□ 0.57
RNF38-208ENST00000488058 WSB1Q9Y6I7 421 aa18.62■□□□□ 0.57
RNF38-208ENST00000488058 TRBV6-7A0A0A0MS04 114 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 PROP1O75360 226 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 NDUFA3O95167 84 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 IGF1P05019 195 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 TFAP2AP05549 437 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 LINC00205P59089 165 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 KPRPQ5T749 579 aaPredicted RBP18.61■□□□□ 0.57
RNF38-208ENST00000488058 ZNF695Q8IW36 515 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 WFDC9Q8NEX5 89 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 TSPAN14Q8NG11 270 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 OR5AN1Q8NGI8 311 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 ST6GALNAC5Q9BVH7 336 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 OR51J1Q9H342 316 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 RHBDL2Q9NX52 303 aa18.61■□□□□ 0.57
RNF38-208ENST00000488058 IGKV1D-8A0A087WSZ0 117 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 A0A087WXM4 84 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 IGHV7-81A0A0B4J1V7 117 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 RRHO14718 337 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 SCGNO76038 276 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 TNFAIP8O95379 198 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 APOA2P02652 100 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 OR5H8P0DN80 308 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 FOXE3Q13461 319 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 ETV3LQ6ZN32 361 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 ZNF383Q8NA42 475 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 OR5H6Q8NGV6 325 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 NUDCD2Q8WVJ2 157 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 DUX3Q96PT4 197 aa18.6■□□□□ 0.57
RNF38-208ENST00000488058 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.6■□□□□ 0.57
RNF38-208ENST00000488058 TMEM235A6NFC5 223 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 G3V318 75 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 RBBP9O75884 186 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 ELANEP08246 267 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 THBS3P49746 956 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 GNG2P59768 71 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 CFHR3Q02985 330 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 HACD4Q5VWC8 232 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 LINC00482Q8N8I6 264 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.59■□□□□ 0.57
RNF38-208ENST00000488058 ABHD5Q8WTS1 349 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 CLCC1Q96S66 551 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 TOLLIPQ9H0E2 274 aa18.59■□□□□ 0.57
RNF38-208ENST00000488058 IGHG4P01861 327 aa18.58■□□□□ 0.56
RNF38-208ENST00000488058 DTYMKP23919 212 aa18.58■□□□□ 0.56
RNF38-208ENST00000488058 TGFBR1P36897 503 aa18.58■□□□□ 0.56
RNF38-208ENST00000488058 RPS16P62249 146 aaKnown RBP18.58■□□□□ 0.56
RNF38-208ENST00000488058 TIMM50Q3ZCQ8 353 aa18.58■□□□□ 0.56
RNF38-208ENST00000488058 MRPL41Q8IXM3 137 aaKnown RBP18.58■□□□□ 0.56
RNF38-208ENST00000488058 SLC35D1Q9NTN3 355 aa18.58■□□□□ 0.56
RNF38-208ENST00000488058 SDHAF2Q9NX18 166 aa18.58■□□□□ 0.56
RNF38-208ENST00000488058 METTL1Q9UBP6 276 aaKnown RBP18.58■□□□□ 0.56
RNF38-208ENST00000488058 TRAV41A0A0B4J266 112 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 J3QRK9 145 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 DIRAS3O95661 229 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 SLC6A1P30531 599 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 MYCNOSP40205 109 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 RAB25P57735 213 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 LSM3P62310 102 aaKnown RBP18.57■□□□□ 0.56
RNF38-208ENST00000488058 SRSF7Q16629 238 aaKnown RBP eCLIP18.57■□□□□ 0.56
RNF38-208ENST00000488058 ECSCRQ19T08 205 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 ZNF260Q3ZCT1 412 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 FOXB2Q5VYV0 432 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 Q6ZS49 121 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 PDPNQ86YL7 162 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 RCC1LQ96I51 464 aaKnown RBP18.57■□□□□ 0.56
RNF38-208ENST00000488058 ZNF580Q9UK33 172 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 ETV7Q9Y603 341 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 A3GALT2U3KPV4 340 aa18.57■□□□□ 0.56
RNF38-208ENST00000488058 AIREO43918 545 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 IGKV1-16P04430 117 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 PITPNAQ00169 270 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 PSG5Q15238 335 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 DEFB136Q30KP8 78 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 TMEM65Q6PI78 240 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 H1FOOQ8IZA3 346 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms