RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 C3orf18Q9UK00 162 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 DNAJC15Q9Y5T4 150 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 HELZP42694 1942 aaKnown RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 DOCK3Q8IZD9 2030 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 OBSL1O75147 1896 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 DYSFO75923 2080 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 DENND4CQ5VZ89 1909 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 TRAV8-4A0A0B4J246 113 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 IGHV1-69DA0A0B4J2H0 117 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 ARRDC5A6NEK1 342 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 PRORSD1PA6NEY8 169 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 F5H5T6 163 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 J3QLI3 93 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 J3QT63 122 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 PSPHP1O15172 72 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 SLC22A1O15245 554 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 FGF16O43320 207 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 TRBV12-3P01733 135 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 P01737 135 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 ORM1P02763 201 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 MMP7P09237 267 aaPredicted RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 LIMS3P0CW19 117 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 LIMS4P0CW20 117 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 ZNF7P17097 686 aaPredicted RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 PAX6P26367 422 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 CD34P28906 385 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 GGT2P36268 569 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 SERPINB10P48595 397 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 RAB38P57729 211 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 MTPNP58546 118 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 C1QTNF8P60827 252 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 GNA12Q03113 381 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 KRR1Q13601 381 aaKnown RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 POU6F1Q14863 301 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 TRAM1Q15629 374 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 CEACAM16Q2WEN9 425 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 SLC36A2Q495M3 483 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 CDNFQ49AH0 187 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 ATP6AP1LQ52LC2 224 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 OR10J3Q5JRS4 329 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 TMEM236Q5W0B7 351 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 HBMQ6B0K9 141 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 ZNF773Q6PK81 442 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 CYHR1Q6ZMK1 362 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 DEFB132Q7Z7B7 95 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 LRP11Q86VZ4 500 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 GPR26Q8NDV2 337 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 C19orf18Q8NEA5 215 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 LFNGQ8NES3 379 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 OR4K17Q8NGC6 315 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 OR2AE1Q8NHA4 323 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 ENKURQ8TC29 256 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 NT5CQ8TCD5 201 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 DYNC2LI1Q8TCX1 351 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 TWIST2Q8WVJ9 160 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 S100ZQ8WXG8 99 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 BORCS5Q969J3 196 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 TESCQ96BS2 214 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 TMA16Q96EY4 203 aaKnown RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 APOL4Q9BPW4 351 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 C1orf50Q9BV19 199 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 EMC6Q9BV81 110 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 PARD6GQ9BYG4 376 aaPredicted RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 NXF2Q9GZY0 626 aaKnown RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 PARVBQ9HBI1 364 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 C12orf4Q9NQ89 552 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 PCTPQ9UKL6 214 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 PAIP2BQ9ULR5 123 aaKnown RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 BPTFQ12830 3046 aa1.94□□□□□ -2.1
TTC3-220ENST00000487711 COL5A1P20908 1838 aaPredicted RBP1.94□□□□□ -2.1
TTC3-220ENST00000487711 ANAPC1Q9H1A4 1944 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 PLXNA2O75051 1894 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 IGKV1-27A0A075B6S5 117 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 A0A096LPI6 279 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 ISPDA4D126 451 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 ZNF98A6NK75 572 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 CLDN24A6NM45 220 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 FTCDNL1E5RQL4 147 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 TXNDC9O14530 226 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 UBFD1O14562 309 aaKnown RBP1.93□□□□□ -2.1
TTC3-220ENST00000487711 ACOX3O15254 700 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 ENSAO43768 121 aaKnown RBP1.93□□□□□ -2.1
TTC3-220ENST00000487711 MPZL2O60487 215 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 PIAS1O75925 651 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 OR5F1O95221 314 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 C8GP07360 202 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 IFI6P09912 130 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 MPC1LP0DKB6 136 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 HMGA1P17096 107 aaKnown RBP1.93□□□□□ -2.1
TTC3-220ENST00000487711 S100A1P23297 94 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 HLA-DMAP28067 261 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 SERPINB1P30740 379 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 POLR2IP36954 125 aaKnown RBP1.93□□□□□ -2.1
TTC3-220ENST00000487711 TGM4P49221 684 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 POLR2JP52435 117 aaKnown RBP1.93□□□□□ -2.1
TTC3-220ENST00000487711 GFERP55789 205 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 COPZ1P61923 177 aa1.93□□□□□ -2.1
TTC3-220ENST00000487711 RPL23P62829 140 aaKnown RBP1.93□□□□□ -2.1
TTC3-220ENST00000487711 S100A12P80511 92 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 244.3 ms