RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CGB3P0DN86 165 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 CGB7P0DN87 165 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 HIST1H1EP10412 219 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 RPL12P30050 165 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 ADORA1P30542 326 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 GABRA3P34903 492 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 TCL1AP56279 114 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 DYNLL1P63167 89 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 DR1Q01658 176 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 SRSF6Q13247 344 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 LRRC26Q2I0M4 334 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 HENMT1Q5T8I9 393 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 SYPL2Q5VXT5 272 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 FAM173BQ6P4H8 233 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 COMMD7Q86VX2 200 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 MUC15Q8N387 334 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 HAVCR2Q8TDQ0 301 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 TMA16Q96EY4 203 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 PRSS27Q9BQR3 290 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 TIPINQ9BVW5 301 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 TSSK6Q9BXA6 273 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 MROQ9BYG7 248 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 CHST5Q9GZS9 411 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 CENPHQ9H3R5 247 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 GLS2Q9UI32 602 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 STOML2Q9UJZ1 356 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 PRELID1Q9Y255 219 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 ZNF337Q9Y3M9 751 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 SAMHD1Q9Y3Z3 626 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 LSM5Q9Y4Y9 91 aaKnown RBP1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 ALG5Q9Y673 324 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 A0A1W2PP64 1363 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 UNC13AQ9UPW8 1703 aa1.69□□□□□ -2.14
HMGB1P36-201ENST00000487709 ZSWIM8A7E2V4 1837 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 E5RI56 91 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 M0QYV0 167 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 ZNF189O75820 626 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 ARL6IP5O75915 188 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 FUSP35637 526 aaKnown RBP eCLIP1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 CAPZBP47756 277 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 SULT1A1P50225 295 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 SULT1A2P50226 295 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 SERPINB9P50453 376 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR4D2P58180 307 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 CXCR4P61073 352 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 B2MP61769 119 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 LSM6P62312 80 aaKnown RBP1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 SLC35A2P78381 396 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 SKP2Q13309 424 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 PPP1R1AQ13522 171 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 APOFQ13790 326 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 C1DQ13901 141 aaKnown RBP1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 HIST3H3Q16695 136 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 SCGB1D4Q6XE38 83 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 MSRB3Q8IXL7 192 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR1M1Q8NGA1 313 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR11G2Q8NGC1 345 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR10D4PQ8NGN7 298 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR11L1Q8NGX0 322 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR2V1Q8NHB1 315 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 SLC37A2Q8TED4 501 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 TMBIM1Q969X1 311 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 IMP4Q96G21 291 aaKnown RBP1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 B9D2Q9BPU9 175 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 PARVAQ9NVD7 372 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 POLR1DQ9Y2S0 133 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 ARL2BPQ9Y2Y0 163 aa1.68□□□□□ -2.14
HMGB1P36-201ENST00000487709 IGKV1D-37A0A075B6S9 117 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 TEX50A0A1B0GTY4 177 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 A8MWP6 167 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 C8orf87E5RJ46 101 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 COPEO14579 308 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 EPPINO95925 133 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 LTAP01374 205 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 HBZP02008 142 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 IL3P08700 152 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 ZNF22P17026 224 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 GADD45AP24522 165 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 MIPP30301 263 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 H2BFSP57053 126 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 ERVS71-1P61550 626 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 DAD1P61803 113 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR8G1Q15617 311 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 SNCBQ16143 134 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 GUK1Q16774 197 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 CENPWQ5EE01 88 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 N4BP2L1Q5TBK1 243 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 C1orf195Q5TG92 126 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 GID4Q8IVV7 300 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 NATD1Q8N6N6 113 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR10P1Q8NGE3 313 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 OR9I1Q8NGQ6 314 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 LMX1AQ8TE12 382 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 TNFAIP8L1Q8WVP5 186 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 TAMM41Q96BW9 452 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 DGCR14Q96DF8 476 aaKnown RBP1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 CEP19Q96LK0 163 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 AICDAQ9GZX7 198 aa1.67□□□□□ -2.14
HMGB1P36-201ENST00000487709 ALX4Q9H161 411 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms