RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 H7C2Y5 167 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 IRF3Q14653 427 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 PLGLAQ15195 96 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 P2RY14Q15391 338 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 MED22Q15528 200 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 LIPKQ5VXJ0 399 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 CD200R1LQ6Q8B3 271 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 TMEM91Q6ZNR0 172 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 DRAXINQ8NBI3 349 aaPredicted RBP9.42□□□□□ -0.9
VPS16-208ENST00000487461 OR6M1Q8NGM8 313 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 CLCC1Q96S66 551 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 FAM103A1Q9BTL3 118 aaKnown RBP9.42□□□□□ -0.9
VPS16-208ENST00000487461 VCXQ9H320 206 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 GHITMQ9H3K2 345 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 Q9N2K0 584 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 ISYNA1Q9NPH2 558 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 WASHC3Q9Y3C0 194 aa9.42□□□□□ -0.9
VPS16-208ENST00000487461 IGHV4OR15-8A0A075B7B6 117 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 A0A087WW49 117 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 SAP30O75446 220 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 RBBP9O75884 186 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 LGALS1P09382 135 aaKnown RBP9.41□□□□□ -0.9
VPS16-208ENST00000487461 ARSBP15848 533 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 SPNP16150 400 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 ZBTB25P24278 435 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 HLA-DRB3P79483 266 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 TMEM267Q0VDI3 215 aaPredicted RBP9.41□□□□□ -0.9
VPS16-208ENST00000487461 PSG5Q15238 335 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 AKIRIN2Q53H80 203 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 UNQ5815/PRO19632Q6UWF5 114 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 ZNF562Q6V9R5 426 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 SBSPONQ8IVN8 264 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 TCTEX1D1Q8N7M0 179 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 ABHD5Q8WTS1 349 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 PTX4Q96A99 478 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 RHOVQ96L33 236 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 MS4A10Q96PG2 267 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 RNF5Q99942 180 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 URM1Q9BTM9 101 aaKnown RBP9.41□□□□□ -0.9
VPS16-208ENST00000487461 SCN3BQ9NY72 215 aa9.41□□□□□ -0.9
VPS16-208ENST00000487461 METTL1Q9UBP6 276 aaKnown RBP9.41□□□□□ -0.9
VPS16-208ENST00000487461 AK6Q9Y3D8 172 aaKnown RBP9.41□□□□□ -0.9
VPS16-208ENST00000487461 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 IGKV1-6A0A0C4DH72 117 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 SLC17A2O00624 439 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 HSPA12AO43301 675 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 IGKV1-16P04430 117 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 HSPB1P04792 205 aaKnown RBP9.4□□□□□ -0.9
VPS16-208ENST00000487461 VEGFCP49767 419 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 RPS16P62249 146 aaKnown RBP9.4□□□□□ -0.9
VPS16-208ENST00000487461 RPS25P62851 125 aaKnown RBP9.4□□□□□ -0.9
VPS16-208ENST00000487461 TPBGQ13641 420 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 ACTBL2Q562R1 376 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 ACSM6Q6P461 480 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 OVCH2Q7RTZ1 564 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 ZNF383Q8NA42 475 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 LFNGQ8NES3 379 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 EDARADDQ8WWZ3 215 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 ARPC1AQ92747 370 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 UFD1Q92890 307 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 ARHGAP5-AS1Q96IT6 56 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 PECRQ9BY49 303 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 PLGRKTQ9HBL7 147 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 HSF4Q9ULV5 492 aa9.4□□□□□ -0.9
VPS16-208ENST00000487461 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 CA2P00918 260 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 HSMCR30P0CW71 290 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 GP9P14770 177 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 CPEP16870 476 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 CLDN12P56749 244 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 TPPP2P59282 170 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 RAB11BQ15907 218 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 C2orf76Q3KRA6 126 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 PLAC9Q5JTB6 97 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 TSNAXQ99598 290 aaKnown RBP9.39□□□□□ -0.91
VPS16-208ENST00000487461 CMSS1Q9BQ75 279 aaKnown RBP9.39□□□□□ -0.91
VPS16-208ENST00000487461 DUSP21Q9H596 190 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 ZNF221Q9UK13 617 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
VPS16-208ENST00000487461 TRIM64CA6NLI5 447 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 TRDCB7Z8K6 153 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 ARPC1BO15143 372 aaKnown RBP9.38□□□□□ -0.91
VPS16-208ENST00000487461 LDLRAD4O15165 306 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 PLA2G7Q13093 441 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 FXYD3Q14802 87 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 PYHIN1Q6K0P9 492 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 FAM3DQ96BQ1 224 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 FLYWCH2Q96CP2 140 aaKnown RBP9.38□□□□□ -0.91
VPS16-208ENST00000487461 C12orf4Q9NQ89 552 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 RDH8Q9NYR8 311 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 TPRKBQ9Y3C4 175 aa9.38□□□□□ -0.91
VPS16-208ENST00000487461 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
VPS16-208ENST00000487461 M0R1X1 148 aa9.37□□□□□ -0.91
VPS16-208ENST00000487461 DENRO43583 198 aaKnown RBP9.37□□□□□ -0.91
VPS16-208ENST00000487461 SLC25A17O43808 307 aa9.37□□□□□ -0.91
VPS16-208ENST00000487461 SPDEFO95238 335 aa9.37□□□□□ -0.91
VPS16-208ENST00000487461 IGLV2-23P01705 113 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms