RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 CLEC18CQ8NCF0 446 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF439Q8NDP4 499 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 CT45A3Q8NHU0 189 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 RNASE11Q8TAA1 199 aaKnown RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 GRPEL2Q8TAA5 225 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 LHFPL5Q8TAF8 219 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 C8orf46Q8TAG6 207 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 TCTEX1D2Q8WW35 142 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 IGFBPL1Q8WX77 278 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 TNFRSF14Q92956 283 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 RRNAD1Q96FB5 475 aaKnown RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ABHD14BQ96IU4 210 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 S1PR3Q99500 378 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 CCL19Q99731 98 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 MFFQ9GZY8 342 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 IFI27L2Q9H2X8 130 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 PATZ1Q9HBE1 687 aaKnown RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 BARX1Q9HBU1 254 aaPredicted RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 MBD2Q9UBB5 411 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 PRELID3BQ9Y3B1 194 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 SESN1Q9Y6P5 492 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 C2CD3Q4AC94 2353 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 LRRK2Q5S007 2527 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 A0A087X0M5 115 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 PPIAL4CA0A0B4J2A2 164 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 A0A1B0GU03 582 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 A0A1B0GX30 115 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 C17orf98A8MV24 154 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 E5RGE8 158 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 F5H0A9 414 aaPredicted RBP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 M0R1X1 148 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 NDUFS8O00217 210 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 ST8SIA3O43173 380 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 RBFOX2O43251 390 aaKnown RBP eCLIP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 FCN3O75636 299 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 LY6HO94772 140 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 OR2F2O95006 317 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 LIPFP07098 398 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 PPIAL4GP0DN37 164 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 IGHV1-8P0DP01 117 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 LYL1P12980 280 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 CCL3L1P16619 93 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 PVALBP20472 110 aaPredicted RBP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 IL3RAP26951 378 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 S100A11P31949 105 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 DUTP33316 252 aaKnown RBP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 LPAR6P43657 344 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 ARHGDIBP52566 201 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF134P52741 427 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 AKR1C2P52895 323 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 DLX6P56179 175 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 S100A10P60903 97 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 GNB2P62879 340 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 TAGLNQ01995 201 aaKnown RBP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 SRSF1Q07955 248 aaKnown RBP eCLIP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 OR2F1Q13607 317 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 RAB32Q13637 225 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF585BQ52M93 769 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 NMSQ5H8A3 153 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 SP5Q6BEB4 398 aaPredicted RBP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 FAM53AQ6NSI3 398 aaPredicted RBP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 FAM71F2Q6NXP2 309 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 ACOT7LQ6ZUV0 252 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 TMUB2Q71RG4 321 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 LYG1Q8N1E2 194 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 LINC00311Q8N616 119 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 LY6G5BQ8NDX9 201 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 OR9G1Q8NH87 305 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF596Q8TC21 504 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 DCUN1D4Q92564 292 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 GPHA2Q96T91 129 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 SSBP3Q9BWW4 388 aaPredicted RBP5.06□□□□□ -1.6
VAMP3-203ENST00000487194 PLSCR3Q9NRY6 295 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 TNFSF18Q9UNG2 199 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 NSG2Q9Y328 171 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 BOLA1Q9Y3E2 137 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 MMP24Q9Y5R2 645 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 USF3Q68DE3 2245 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
VAMP3-203ENST00000487194 NOTCH2Q04721 2471 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 MALRD1Q5VYJ5 2156 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 HRNRQ86YZ3 2850 aaPredicted RBP5.05□□□□□ -1.6
VAMP3-203ENST00000487194 LOC105371242A0A075B767 164 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 SAA2-SAA4A0A096LPE2 208 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 KANTRA0A1W2PQU2 76 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 LINC00473A8K010 186 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 J3QR06 171 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 K7EPK0 472 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 M0R1W7 72 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 WRBO00258 174 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 TOR1AO14656 332 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 RGS13O14921 159 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 SLC31A2O15432 143 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 DEDDO75618 318 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 MMP23AO75900 390 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 SCGB1D2O95969 90 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 HPRT1P00492 218 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 SAA2P0DJI9 122 aaPredicted RBP5.05□□□□□ -1.6
VAMP3-203ENST00000487194 MMP9P14780 707 aa5.05□□□□□ -1.6
VAMP3-203ENST00000487194 CXCL2P19875 107 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms