RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TCTEX1D1Q8N7M0 179 aa15.04■□□□□ -0
PDLIM7-207ENST00000486828 TPRX1Q8N7U7 411 aa15.04■□□□□ -0
PDLIM7-207ENST00000486828 ISOC2Q96AB3 205 aa15.04■□□□□ -0
PDLIM7-207ENST00000486828 RBKSQ9H477 322 aa15.04■□□□□ -0
PDLIM7-207ENST00000486828 MSRB2Q9Y3D2 182 aa15.04■□□□□ -0
PDLIM7-207ENST00000486828 PUS1Q9Y606 427 aaKnown RBP eCLIP15.04■□□□□ -0
PDLIM7-207ENST00000486828 GTF3C1Q12789 2109 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 KIAA2026Q5HYC2 2103 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 DMXL2Q8TDJ6 3036 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 LAMA5O15230 3695 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 IGF2RP11717 2491 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 KRASP01116 189 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 PTAFRP25105 342 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 HABP2Q14520 560 aaPredicted RBP15.03■□□□□ -0
PDLIM7-207ENST00000486828 IGFL3Q6UXB1 125 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 TMEM14EPQ6UXP3 125 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 OR2Z1Q8NG97 314 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 C2CD4CQ8TF44 421 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 TCTEX1D2Q8WW35 142 aa15.03■□□□□ -0
PDLIM7-207ENST00000486828 CHD8Q9HCK8 2581 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 A0A1W2PPH5 198 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 C17orf98A8MV24 154 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 S1PR2O95136 353 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 PRDX2P32119 198 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 BRWD1-AS2P59051 145 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 SERF2P84101 59 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 KHDC3LQ587J8 217 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 WDR61Q9GZS3 305 aaKnown RBP15.02■□□□□ -0
PDLIM7-207ENST00000486828 RPRMQ9NS64 109 aa15.02■□□□□ -0
PDLIM7-207ENST00000486828 ODAMA1E959 279 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 LRRC30A6NM36 301 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 C1orf196B1AJZ1 125 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 C15orf65H3BRN8 121 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 CLDN1O95832 211 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 HTD2P86397 168 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 MSMPQ1L6U9 139 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 BTNL3Q6UXE8 466 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF66Q6ZN08 573 aa15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.02□□□□□ -0.01
PDLIM7-207ENST00000486828 LOC102723971A0A1B0GUV8 181 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 A0A1W2PPE2 198 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 SRRM5B3KS81 715 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 H3BQ15 152 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 SPINT2O43291 252 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 CLDN14O95500 239 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 EGR1P18146 543 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 SLC38A11Q08AI6 406 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 MBD3L1Q8WWY6 194 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 OR4C12Q96R67 309 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 VSIRQ9H7M9 311 aa15.01□□□□□ -0.01
PDLIM7-207ENST00000486828 IGHV3-43A0A0B4J1X8 118 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 RAB29O14966 203 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF737O75373 536 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 ARG1P05089 322 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 ADH4P08319 380 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 IGHV3-43DP0DP04 118 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF83P51522 516 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 FAM90A1Q86YD7 464 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 CYB561D1Q8N8Q1 229 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 RFESDQ8TAC1 157 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 HSD17B10Q99714 261 aaKnown RBP15□□□□□ -0.01
PDLIM7-207ENST00000486828 LAMP3Q9UQV4 416 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 FBP1P09467 338 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 CFHR2P36980 270 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 AKR1D1P51857 326 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF726P1Q15940 193 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 TIMM23BQ5SRD1 257 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 LRP11Q86VZ4 500 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 OR10G4Q8NGN3 311 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 TAF15Q92804 592 aaKnown RBP eCLIP15□□□□□ -0.01
PDLIM7-207ENST00000486828 SEBOXQ9HB31 216 aaPredicted RBP15□□□□□ -0.01
PDLIM7-207ENST00000486828 DUSP13Q9UII6 198 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 PSG11Q9UQ72 335 aa15□□□□□ -0.01
PDLIM7-207ENST00000486828 LOC400499M0QZD8 3231 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 INTS1Q8N201 2190 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 ANKRD11Q6UB99 2663 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 IGKV1D-17A0A075B6S4 117 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 ST8SIA5O15466 376 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 RAB5AP20339 215 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 AGAP20933 346 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 RPL35P42766 123 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 CEBPGP53567 150 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 RPS23P62266 143 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 EDDM3AQ14507 147 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 EIF2S3LQ2VIR3 472 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 Q3ZCU0 254 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 TMEM41BQ5BJD5 291 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF787Q6DD87 383 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 OR8G2PQ6IF36 304 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF474Q6S9Z5 364 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF429Q86V71 674 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 ZNF561Q8N587 486 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 PINX1Q96BK5 328 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 S100PBPQ96BU1 408 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 RAB39BQ96DA2 213 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 AGMATQ9BSE5 352 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 DCTN5Q9BTE1 182 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 GNG13Q9P2W3 67 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 FAM215AQ9Y5M1 114 aa14.99□□□□□ -0.01
PDLIM7-207ENST00000486828 PRR14LQ5THK1 2151 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms