RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 FAM90A24PP0C7X0 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 GABRG2P18507 467 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 THBS3P49746 956 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 HNRNPA3P51991 378 aaKnown RBP9□□□□□ -0.97
CCDC171-208ENST00000486641 RPS16P62249 146 aaKnown RBP9□□□□□ -0.97
CCDC171-208ENST00000486641 PSG4Q00888 419 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF90Q03938 601 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 ATP6V1FQ16864 119 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 RNF151Q2KHN1 245 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FBXO46Q6PJ61 603 aaPredicted RBP9□□□□□ -0.97
CCDC171-208ENST00000486641 UNQ5815/PRO19632Q6UWF5 114 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 ANKRD37Q7Z713 158 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 LMX1AQ8TE12 382 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 RDH5Q92781 318 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 CLDN23Q96B33 292 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 LRFN3Q9BTN0 628 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 LAMA1P25391 3075 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 ASCC3Q8N3C0 2202 aaKnown RBP9□□□□□ -0.97
CCDC171-208ENST00000486641 EML6Q6ZMW3 1958 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 TRAV34A0A0B4J273 112 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 A0A1B0GX78 115 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF32P17041 273 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 Q0VG73 95 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 KRTCAP3Q53RY4 240 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 ZIC4Q8N9L1 334 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF296Q8WUU4 475 aaPredicted RBP9□□□□□ -0.97
CCDC171-208ENST00000486641 APH1AQ96BI3 265 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 STARD4Q96DR4 205 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 KLHDC7BQ96G42 594 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 TRANK1O15050 2925 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 PIGBOS1A0A0B4J2F0 54 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 C5orf67F2Z3F1 127 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 TNFSF11O14788 317 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 NXPH2O95156 264 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 TIMP3P35625 211 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
CCDC171-208ENST00000486641 KMT5CQ86Y97 462 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 CADM4Q8NFZ8 388 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 OR10G8Q8NGN5 311 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 OCC1Q8TAD7 63 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 TMEM147Q9BVK8 224 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 NPCDR1Q9BY65 106 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 MTIF3Q9H2K0 278 aaKnown RBP8.99□□□□□ -0.97
CCDC171-208ENST00000486641 NRN1Q9NPD7 142 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 OR1A1Q9P1Q5 309 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 TBL2Q9Y4P3 447 aaKnown RBP8.99□□□□□ -0.97
CCDC171-208ENST00000486641 COX11Q9Y6N1 276 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 C10orf142B7Z368 130 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 SLC17A3O00476 420 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 FCN1O00602 326 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 CDC34P49427 236 aaPredicted RBP8.99□□□□□ -0.97
CCDC171-208ENST00000486641 FGF12P61328 243 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 KRTAP27-1Q3LI81 207 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 KIAA0895LQ68EN5 471 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 FGFBP3Q8TAT2 258 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 IL1F10Q8WWZ1 152 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 FGF23Q9GZV9 251 aaPredicted RBP8.99□□□□□ -0.97
CCDC171-208ENST00000486641 IGFLR1Q9H665 355 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF586Q9NXT0 402 aa8.99□□□□□ -0.97
CCDC171-208ENST00000486641 IER3P46695 156 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 OR1D5P58170 312 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 TRIP6Q15654 476 aaKnown RBP8.98□□□□□ -0.97
CCDC171-208ENST00000486641 HLA-DRB5Q30154 266 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 DEFB133Q30KQ1 61 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 HLA-BQ31612 363 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 PRAMEF20Q5VT98 475 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 TMPRSS7Q7RTY8 843 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 FGFRL1Q8N441 504 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF738Q8NE65 137 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 GNB4Q9HAV0 340 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 KCNIP2Q9NS61 270 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 MTCH1Q9NZJ7 389 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 CLN8Q9UBY8 286 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF407Q9C0G0 2248 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 SPTBN5Q9NRC6 3674 aaKnown RBP8.98□□□□□ -0.97
CCDC171-208ENST00000486641 WDFY3Q8IZQ1 3526 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 TRAV38-1A0A0B4J264 116 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 C3orf80F5H4A9 247 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 MMP23AO75900 390 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 CA3P07451 260 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 B4GALT1P15291 398 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 NTF4P34130 210 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 CFHR1Q03591 330 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 GCSAMLQ5JQS6 135 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 FADS6Q8N9I5 356 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 TMEM204Q9BSN7 226 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 QTRT1Q9BXR0 403 aaKnown RBP8.98□□□□□ -0.97
CCDC171-208ENST00000486641 WNT10AQ9GZT5 417 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 GSX1Q9H4S2 264 aaPredicted RBP8.98□□□□□ -0.97
CCDC171-208ENST00000486641 IL36BQ9NZH7 164 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 CRIM1Q9NZV1 1036 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF391Q9UJN7 358 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 CNTRLQ7Z7A1 2325 aa8.98□□□□□ -0.97
CCDC171-208ENST00000486641 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 DEGS1O15121 323 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 GPM6AP51674 278 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 RIPPLY2Q5TAB7 128 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 MCEMP1Q8IX19 187 aa8.97□□□□□ -0.97
CCDC171-208ENST00000486641 OR5A2Q8NGI9 324 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms