RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 SLX4Q8IY92 1834 aa1.23□□□□□ -2.21
LTN1-206ENST00000486427 KDM5BQ9UGL1 1544 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 C11orf86A6NJI1 115 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 OR5K4A6NMS3 321 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 COPEO14579 308 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 ORM1P02763 201 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 CRYBA1P05813 215 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 ALOX5APP20292 161 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 OR10J1P30954 320 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 TAS2R45P59539 299 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 HERVK_113P63121 156 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 TMEM267Q0VDI3 215 aaPredicted RBP1.22□□□□□ -2.21
LTN1-206ENST00000486427 C4orf26Q17RF5 130 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 LCN8Q6JVE9 175 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 AGTRAPQ6RW13 159 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 GLT6D1Q7Z4J2 308 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 SPATA24Q86W54 205 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 DEFB119Q8N690 84 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 LFNGQ8NES3 379 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 OR5L1Q8NGL2 311 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 TLCD1Q96CP7 247 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 NKX6-2Q9C056 277 aaPredicted RBP1.22□□□□□ -2.21
LTN1-206ENST00000486427 METTL9Q9H1A3 318 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 NRBP2Q9NSY0 501 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 NDUFB11Q9NX14 153 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 FAM215AQ9Y5M1 114 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 RIMS2Q9UQ26 1411 aa1.22□□□□□ -2.21
LTN1-206ENST00000486427 THSD7AQ9UPZ6 1657 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 DAPL1A0PJW8 107 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 ARRDC5A6NEK1 342 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 TRPC5OSA6NMA1 111 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 OR11H12B2RN74 326 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 PSMG1O95456 288 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 ATP5G1P05496 136 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 ZNF728P0DKX0 622 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 F8A1P23610 371 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 CRATP43155 626 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 XCL1P47992 114 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 SERPINB10P48595 397 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 Q6ZRN7 208 aaPredicted RBP1.21□□□□□ -2.22
LTN1-206ENST00000486427 ATP5L2Q7Z4Y8 100 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 SLC35F6Q8N357 371 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 CNEP1R1Q8N9A8 125 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 OR2D3Q8NGH3 330 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 OR11H2Q8NH07 326 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 SPACA4Q8TDM5 124 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 PPCDCQ96CD2 204 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 MRPS24Q96EL2 167 aaKnown RBP1.21□□□□□ -2.22
LTN1-206ENST00000486427 RBP7Q96R05 134 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 CR1P17927 2039 aa1.21□□□□□ -2.22
LTN1-206ENST00000486427 MDC1Q14676 2089 aaKnown RBP1.2□□□□□ -2.22
LTN1-206ENST00000486427 DENND4BO75064 1496 aaPredicted RBP1.2□□□□□ -2.22
LTN1-206ENST00000486427 ERICH2A1L162 156 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 METTL15A6NJ78 407 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 FTCDNL1E5RQL4 147 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 MRASO14807 208 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 ADAP1O75689 374 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 NPPAP01160 153 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 IGHV1-69P01742 117 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 MIPP30301 263 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 GRPRP30550 384 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 CA7P43166 264 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 SNAP25P60880 206 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 ZNF90Q03938 601 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 SMAGPQ0VAQ4 97 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 TMED1Q13445 227 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 HLA-DRB5Q30154 266 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 TMEM31Q5JXX7 168 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 CLDND2Q8NHS1 167 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 FGF13Q92913 245 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 PARVAQ9NVD7 372 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 TP53TG1Q9Y2A0 90 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 NCKAP5O14513 1909 aa1.2□□□□□ -2.22
LTN1-206ENST00000486427 MDFIC2A0A1B0GVS7 189 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 C2orf74A8MZ97 194 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 CCRL2O00421 344 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 GSTZ1O43708 216 aaPredicted RBP1.19□□□□□ -2.22
LTN1-206ENST00000486427 NEMFO60524 1076 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 NDUFB2O95178 105 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 LINC00614P0C842 121 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 PEBP1P30086 187 aaKnown RBP1.19□□□□□ -2.22
LTN1-206ENST00000486427 HINT1P49773 126 aaPredicted RBP1.19□□□□□ -2.22
LTN1-206ENST00000486427 AMTNQ6UX39 209 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 RIBC1Q8N443 379 aaPredicted RBP1.19□□□□□ -2.22
LTN1-206ENST00000486427 OR4X2Q8NGF9 303 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 ZNF563Q8TA94 476 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 CPNE2Q96FN4 548 aaPredicted RBP1.19□□□□□ -2.22
LTN1-206ENST00000486427 MIEN1Q9BRT3 115 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 TIMM21Q9BVV7 248 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 BBS2Q9BXC9 721 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 MROQ9BYG7 248 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 REREQ9P2R6 1566 aa1.19□□□□□ -2.22
LTN1-206ENST00000486427 KLK5Q9Y337 293 aaPredicted RBP1.19□□□□□ -2.22
LTN1-206ENST00000486427 PUS1Q9Y606 427 aaKnown RBP eCLIP1.19□□□□□ -2.22
LTN1-206ENST00000486427 RGS12O14924 1447 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 TRAV8-1A0A0A6YYK1 113 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 SIGLEC16A6NMB1 481 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 M0QX08 132 aa1.18□□□□□ -2.22
LTN1-206ENST00000486427 AZIN1O14977 448 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms