RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 MAGT1Q9H0U3 335 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 IFI27L2Q9H2X8 130 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 LINC00574Q9H8X3 128 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 TAS2R3Q9NYW6 316 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 KAAG1Q9UBP8 84 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 CTSZQ9UBR2 303 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 LINC00473A8K010 186 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 C17orf98A8MV24 154 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 LYNX1G3V0Z9 82 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 ITGB1BP1O14713 200 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 TAAR5O14804 337 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 SLC31A2O15432 143 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 NDUFA2O43678 99 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 SSSCA1O60232 199 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 GPR137BO60478 399 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 LYNX1P0DP58 116 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 ZNF273Q14593 569 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 IZUMO4Q1ZYL8 232 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 PRAMEF5Q5TYX0 476 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 H1FXQ92522 213 aaKnown RBP13.79□□□□□ -0.2
CTSA-207ENST00000484855 PHYHIPLQ96FC7 376 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 GAL3ST2Q9H3Q3 398 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 CACNG5Q9UF02 275 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 HRNRQ86YZ3 2850 aaPredicted RBP13.79□□□□□ -0.2
CTSA-207ENST00000484855 LRBAP50851 2863 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 B8ZZF3 427 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 WRBO00258 174 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 DVL1O14640 695 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 PITX3O75364 302 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 COL8A2P25067 703 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 ID3Q02535 119 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 UTF1Q5T230 341 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 FAM212BQ9NTI7 297 aaPredicted RBP13.79□□□□□ -0.2
CTSA-207ENST00000484855 FBXL17Q9UF56 701 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 IGSF10Q6WRI0 2623 aa13.79□□□□□ -0.2
CTSA-207ENST00000484855 DUTP33316 252 aaKnown RBP13.78□□□□□ -0.2
CTSA-207ENST00000484855 GPR157Q5UAW9 335 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 C11orf71Q6IPW1 123 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 Q6ZRM9 215 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 C11orf1Q9H5F2 150 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 LPAR3Q9UBY5 353 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 A0A1W2PPE3 182 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 M0R1X1 148 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 MMP23AO75900 390 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 ATG12O94817 140 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 S1PR2O95136 353 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 TMEM33P57088 247 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 BRWD1-AS2P59051 145 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 VAMP2P63027 116 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 RPL39P5Q59GN2 51 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 CT45A1Q5HYN5 189 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 BAP18Q8IXM2 172 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 CT45A3Q8NHU0 189 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 ZNF714Q96N38 554 aa13.78□□□□□ -0.2
CTSA-207ENST00000484855 RPUSD1Q9UJJ7 312 aaKnown RBP13.78□□□□□ -0.2
CTSA-207ENST00000484855 NMBP08949 121 aa13.77□□□□□ -0.21
CTSA-207ENST00000484855 LINC00205P59089 165 aa13.77□□□□□ -0.21
CTSA-207ENST00000484855 FAM74A1Q5RGS3 127 aa13.77□□□□□ -0.21
CTSA-207ENST00000484855 SMIM3Q9BZL3 60 aa13.77□□□□□ -0.21
CTSA-207ENST00000484855 MMP24Q9Y5R2 645 aa13.77□□□□□ -0.21
CTSA-207ENST00000484855 DOCK11Q5JSL3 2073 aa13.77□□□□□ -0.21
CTSA-207ENST00000484855 PROP1O75360 226 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 SOD3P08294 240 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 G6PCP35575 357 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 GNG10P50151 68 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 TMEM200BQ69YZ2 307 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 RPL7L1Q6DKI1 246 aaKnown RBP13.76□□□□□ -0.21
CTSA-207ENST00000484855 OR2C3Q8N628 320 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 ZNF439Q8NDP4 499 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 OR10A7Q8NGE5 316 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 CITED4Q96RK1 184 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 SLC25A32Q9H2D1 315 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 LAMP3Q9UQV4 416 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 USP24Q9UPU5 2620 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 KRASP01116 189 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 MMP9P14780 707 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 CCL3L1P16619 93 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 CAV2P51636 162 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 EIF5AP63241 154 aaKnown RBP13.76□□□□□ -0.21
CTSA-207ENST00000484855 NCR3LG1Q68D85 454 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 CLEC9AQ6UXN8 241 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 CD300LFQ8TDQ1 290 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 GAB2Q9UQC2 676 aa13.76□□□□□ -0.21
CTSA-207ENST00000484855 SAA2-SAA4A0A096LPE2 208 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 CHST1O43916 411 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 IGHV2-70P01814 119 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 SAA2P0DJI9 122 aaPredicted RBP13.75□□□□□ -0.21
CTSA-207ENST00000484855 DAOP14920 347 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 LYG1Q8N1E2 194 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.75□□□□□ -0.21
CTSA-207ENST00000484855 BSCL2Q96G97 398 aaPredicted RBP13.75□□□□□ -0.21
CTSA-207ENST00000484855 LYRM2Q9NU23 88 aaPredicted RBP13.75□□□□□ -0.21
CTSA-207ENST00000484855 AUP1Q9Y679 476 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 FAM24AA6NFZ4 105 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 KIAA1324LA8MWY0 1029 aaPredicted RBP13.75□□□□□ -0.21
CTSA-207ENST00000484855 RAB29O14966 203 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 FSTL3O95633 263 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 DANCRP0C864 163 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms