RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 HEXA-AS1Q9H8Q6 139 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 LIN7CQ9NUP9 197 aaKnown RBP16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 B3GALNT1O75752 331 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 TOX4O94842 621 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 MMP9P14780 707 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 PRB3Q04118 309 aaPredicted RBP16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 CATR1Q13166 79 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 ZNF66Q6ZN08 573 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 PNKDQ8N490 385 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 BEND2Q8NDZ0 799 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 COQ8AQ8NI60 647 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 CHAC2Q8WUX2 184 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 TP53RKQ96S44 253 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 S1PR3Q99500 378 aa16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 HSD17B10Q99714 261 aaKnown RBP16.68■□□□□ 0.26
VCPKMT-203ENST00000484763 PRRC2AP48634 2157 aaKnown RBP16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 HMX3A6NHT5 357 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 H0Y980 276 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 IGLV1-47P01700 117 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 TRAPPC2P0DI81 140 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 TRAPPC2BP0DI82 140 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 HLA-DRB5Q30154 266 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 UXS1Q8NBZ7 420 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 PCGF1Q9BSM1 259 aa16.67■□□□□ 0.26
VCPKMT-203ENST00000484763 CR1P17927 2039 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 A0A0B4J2A0 478 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 M0R1X1 148 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 PROP1O75360 226 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 IL3RAP26951 378 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 TMEM187Q14656 261 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 ANKRD55Q3KP44 614 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 SP6Q3SY56 376 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 NCR3LG1Q68D85 454 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 LINC01356Q8N9X3 169 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 OR11H6Q8NGC7 330 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 ZNF251Q9BRH9 671 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 SHPKQ9UHJ6 478 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 TRAV20A0A0B4J274 112 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 ZNF16P17020 682 aaPredicted RBP16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 HOXB4P17483 251 aaPredicted RBP16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 DUTP33316 252 aaKnown RBP16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 PAX8Q06710 450 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 FAM71F2Q6NXP2 309 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 ZNF833PQ6ZTB9 187 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 WFDC11Q8NEX6 87 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 GLYATL2Q8WU03 294 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 TMEM186Q96B77 213 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 TMEM222Q9H0R3 208 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 PRR13Q9NZ81 148 aa16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 AMMECR1Q9Y4X0 333 aaPredicted RBP16.66■□□□□ 0.26
VCPKMT-203ENST00000484763 ZNF137PP52743 207 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 SRPXP78539 464 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 KLRD1Q13241 179 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 FCN2Q15485 313 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 DCAF12L2Q5VW00 463 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 HCP5Q6MZN7 132 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 LIN54Q6MZP7 749 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 C1orf229Q6ZS94 237 aaPredicted RBP16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 MAPK1IP1LQ8NDC0 245 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 TCTEX1D2Q8WW35 142 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 TBX15Q96SF7 602 aa16.65■□□□□ 0.26
VCPKMT-203ENST00000484763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.64■□□□□ 0.254e-7■■■■■ 43.8
VCPKMT-203ENST00000484763 SULT1A3P0DMM9 295 aa16.64■□□□□ 0.25
VCPKMT-203ENST00000484763 SULT1A4P0DMN0 295 aa16.64■□□□□ 0.25
VCPKMT-203ENST00000484763 UCP1P25874 307 aa16.64■□□□□ 0.25
VCPKMT-203ENST00000484763 RPL30P62888 115 aaKnown RBP16.64■□□□□ 0.25
VCPKMT-203ENST00000484763 LIAT1Q6ZQX7 453 aa16.64■□□□□ 0.25
VCPKMT-203ENST00000484763 OR4P4Q8NGL7 312 aa16.64■□□□□ 0.25
VCPKMT-203ENST00000484763 MSI2Q96DH6 328 aaKnown RBP16.64■□□□□ 0.25
VCPKMT-203ENST00000484763 CCDC168Q8NDH2 2452 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 LINC00473A8K010 186 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 ARG1P05089 322 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 GATA3P23771 443 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 TCTEX1D1Q8N7M0 179 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 DRAXINQ8NBI3 349 aaPredicted RBP16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 HIF1ANQ9NWT6 349 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 DBX1A6NMT0 343 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 ODF3BA8MYP8 253 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 RNASEK-C17orf49H0YIS7 233 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 BUB1B-PAK6H3BSN5 160 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 THBS3P49746 956 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 TMEM249Q2WGJ8 235 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 LGI3Q8N145 548 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 LRTM2Q8N967 370 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 OR11H7Q8NGC8 314 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 ST6GALNAC6Q969X2 333 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 ADTRPQ96IZ2 230 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 MGAT4CQ9UBM8 478 aa16.63■□□□□ 0.25
VCPKMT-203ENST00000484763 CREBBPQ92793 2442 aa16.62■□□□□ 0.25
VCPKMT-203ENST00000484763 PFDN1O60925 122 aa16.62■□□□□ 0.25
VCPKMT-203ENST00000484763 SERPINE2P07093 398 aa16.62■□□□□ 0.25
VCPKMT-203ENST00000484763 TMEM56Q96MV1 263 aa16.62■□□□□ 0.25
VCPKMT-203ENST00000484763 FAM212BQ9NTI7 297 aaPredicted RBP16.62■□□□□ 0.25
VCPKMT-203ENST00000484763 TMEM56-RWDD3S4R434 201 aa16.62■□□□□ 0.25
VCPKMT-203ENST00000484763 GOSR2O14653 212 aa16.61■□□□□ 0.25
VCPKMT-203ENST00000484763 CDS2O95674 445 aa16.61■□□□□ 0.25
VCPKMT-203ENST00000484763 IGHV4-31P0DP07 118 aa16.61■□□□□ 0.25
VCPKMT-203ENST00000484763 CXCL3P19876 107 aa16.61■□□□□ 0.25
VCPKMT-203ENST00000484763 OR2B11Q5JQS5 317 aa16.61■□□□□ 0.25
VCPKMT-203ENST00000484763 AKAP14Q86UN6 197 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms