RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 Q8N9W7 124 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 BEST4Q8NFU0 473 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 DYNC2LI1Q8TCX1 351 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 ADAM30Q9UKF2 790 aa12.62□□□□□ -0.39
UPF3A-208ENST00000484246 H3BMQ9 156 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 HPGDSO60760 199 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
UPF3A-208ENST00000484246 RBBP9O75884 186 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 HLA-DQB1P01920 261 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 OR8U9P0C7N5 309 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 NAT1P18440 290 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 ELK1P19419 428 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 MC5RP33032 325 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 SOX6P35712 828 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 HNF4GQ14541 408 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 OR8U1Q8NH10 309 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 SNAPC3Q92966 411 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 ISOC1Q96CN7 298 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 SCPEP1Q9HB40 452 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 OR2W1Q9Y3N9 320 aa12.61□□□□□ -0.39
UPF3A-208ENST00000484246 IGHG2P01859 326 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 PTHLHP12272 177 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 MSMO1Q15800 293 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 PRR31Q5SQ13 230 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 FAM131AQ6UXB0 335 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 GVQW1Q8N7I0 195 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 NPBQ8NG41 125 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 GPX8Q8TED1 209 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 C5orf30Q96GV9 206 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 RNF5Q99942 180 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 RBM38Q9H0Z9 239 aaKnown RBP12.6□□□□□ -0.39
UPF3A-208ENST00000484246 SDHAF2Q9NX18 166 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 ZNF580Q9UK33 172 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 RNF150Q9ULK6 438 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 WASHC3Q9Y3C0 194 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 CEPT1Q9Y6K0 416 aa12.6□□□□□ -0.39
UPF3A-208ENST00000484246 SMIM31A0A1B0GVY4 71 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 ZNF701M0R085 212 aaPredicted RBP12.59□□□□□ -0.39
UPF3A-208ENST00000484246 SULT1C2O00338 296 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 SLC22A5O76082 557 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 NDUFA3O95167 84 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 PRSS3P35030 304 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 ARPC4P59998 168 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 ACTBP60709 375 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
UPF3A-208ENST00000484246 SRSF4Q08170 494 aaKnown RBP12.59□□□□□ -0.39
UPF3A-208ENST00000484246 TMEM95Q3KNT9 176 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 PDPNQ86YL7 162 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 ZNF383Q8NA42 475 aa12.59□□□□□ -0.39
UPF3A-208ENST00000484246 M0R1X1 148 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 VSIG10L2P0DP72 767 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
UPF3A-208ENST00000484246 LUMP51884 338 aaPredicted RBP12.58□□□□□ -0.4
UPF3A-208ENST00000484246 MMDQ15546 238 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 OR5AP2Q8NGF4 316 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 ADTRPQ96IZ2 230 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 SLIRPQ9GZT3 109 aaKnown RBP12.58□□□□□ -0.4
UPF3A-208ENST00000484246 MIXL1Q9H2W2 232 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 IFT46Q9NQC8 304 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 NECAP2Q9NVZ3 263 aa12.58□□□□□ -0.4
UPF3A-208ENST00000484246 SH2D7A6NKC9 451 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-208ENST00000484246 NCBP2LA6PVI3 153 aaKnown RBP12.57□□□□□ -0.4
UPF3A-208ENST00000484246 NBR2O15453 112 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 KCNAB3O43448 404 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 SPDEFO95238 335 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 HLA-DRB1P01911 266 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 APOA2P02652 100 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 THBS3P49746 956 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 F2RL1P55085 397 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 TAS2R46P59540 309 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 CDK10Q15131 360 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 ARSJQ5FYB0 599 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-208ENST00000484246 GLDNQ6ZMI3 551 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-208ENST00000484246 SLC35E3Q7Z769 313 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 C15orf40Q8WUR7 153 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 DDB2Q92466 427 aa12.57□□□□□ -0.4
UPF3A-208ENST00000484246 RBM7Q9Y580 266 aaKnown RBP12.57□□□□□ -0.4
UPF3A-208ENST00000484246 IGKV1D-13A0A0B4J2D9 117 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 FAM25AB3EWG3 89 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 FAM25CB3EWG5 89 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 FAM25GB3EWG6 89 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 PEX14O75381 377 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 FBXO24O75426 580 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 IGLV2-14P01704 120 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 IGKV1-13P0DP09 117 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 EIF4EBP1Q13541 118 aaPredicted RBP12.56□□□□□ -0.4
UPF3A-208ENST00000484246 C5orf64Q2M2E5 130 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 OVCH2Q7RTZ1 564 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 DRAXINQ8NBI3 349 aaPredicted RBP12.56□□□□□ -0.4
UPF3A-208ENST00000484246 GIMAP1Q8WWP7 306 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 RITA1Q96K30 269 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 RASL11BQ9BPW5 248 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 NXF2Q9GZY0 626 aaKnown RBP12.56□□□□□ -0.4
UPF3A-208ENST00000484246 EXTL2Q9UBQ6 330 aa12.56□□□□□ -0.4
UPF3A-208ENST00000484246 M0QZ24 198 aa12.55□□□□□ -0.4
UPF3A-208ENST00000484246 AP4M1O00189 453 aa12.55□□□□□ -0.4
UPF3A-208ENST00000484246 PPYP01298 95 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms