RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 VBP1P61758 197 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 NCS1P62166 190 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 LSM3P62310 102 aaKnown RBP7.93□□□□□ -1.14
CPSF4-213ENST00000484112 CD83Q01151 205 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 TAGLNQ01995 201 aaKnown RBP7.93□□□□□ -1.14
CPSF4-213ENST00000484112 DIAPH2-AS1Q14236 149 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 HES1Q14469 280 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 GNMTQ14749 295 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 KHDC1LQ5JSQ8 128 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 GPR107Q5VW38 600 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 Q8N6K4 173 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 OR5H6Q8NGV6 325 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 RAB2BQ8WUD1 216 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 RNF5Q99942 180 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 RDH8Q9NYR8 311 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 CEPT1Q9Y6K0 416 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 NBEAL2Q6ZNJ1 2754 aa7.93□□□□□ -1.14
CPSF4-213ENST00000484112 IGKV1-6A0A0C4DH72 117 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 TMEM235A6NFC5 223 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 RBBP9O75884 186 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 SLC22A5O76082 557 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 GSTT2P0CG29 244 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 GSTT2BP0CG30 244 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 ZNF182P17025 639 aaPredicted RBP7.92□□□□□ -1.14
CPSF4-213ENST00000484112 TGFBR1P36897 503 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 LSAMPQ13449 338 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 CNPY1Q3B7I2 92 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 MZT2AQ6P582 158 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 CNIH2Q6PI25 160 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 SAMD12Q8N8I0 201 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 RCC1LQ96I51 464 aaKnown RBP7.92□□□□□ -1.14
CPSF4-213ENST00000484112 CYYR1Q96J86 154 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 EAF1Q96JC9 268 aaPredicted RBP7.92□□□□□ -1.14
CPSF4-213ENST00000484112 NABP2Q9BQ15 211 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 GINS4Q9BRT9 223 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 C11orf54Q9H0W9 315 aaPredicted RBP7.92□□□□□ -1.14
CPSF4-213ENST00000484112 AUNIPQ9H7T9 357 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 LIN7CQ9NUP9 197 aaKnown RBP7.92□□□□□ -1.14
CPSF4-213ENST00000484112 ANXA10Q9UJ72 324 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 ZNF221Q9UK13 617 aa7.92□□□□□ -1.14
CPSF4-213ENST00000484112 TSSC4Q9Y5U2 329 aaPredicted RBP7.92□□□□□ -1.14
CPSF4-213ENST00000484112 TRAV18A0A075B6X5 111 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 ST8SIA5O15466 376 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 AMY1AP04745 511 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 AMY2AP04746 511 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 CD24P25063 80 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 SOX6P35712 828 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 GPR12P47775 334 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 REG1BP48304 166 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 TCTEX1D4Q5JR98 221 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 TMEM69Q5SWH9 247 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 FAM53AQ6NSI3 398 aaPredicted RBP7.91□□□□□ -1.14
CPSF4-213ENST00000484112 HOGA1Q86XE5 327 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 C5orf56Q8N8D9 126 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 C15orf40Q8WUR7 153 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 DPF1Q92782 380 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 ZNF251Q9BRH9 671 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 ST6GALNAC5Q9BVH7 336 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 GON7Q9BXV9 100 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 PTTG2Q9NZH5 202 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 OR1A1Q9P1Q5 309 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 ZNF580Q9UK33 172 aa7.91□□□□□ -1.14
CPSF4-213ENST00000484112 BET1O15155 118 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 NOL3O60936 208 aaKnown RBP7.9□□□□□ -1.14
CPSF4-213ENST00000484112 DUS4LO95620 317 aaKnown RBP7.9□□□□□ -1.14
CPSF4-213ENST00000484112 MSMO1Q15800 293 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 ABCA11PQ4W5N1 156 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 IGSF11Q5DX21 431 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 C10orf99Q6UWK7 81 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 H1FOOQ8IZA3 346 aaPredicted RBP7.9□□□□□ -1.14
CPSF4-213ENST00000484112 OR4X2Q8NGF9 303 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 OR5AN1Q8NGI8 311 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 NUDCD2Q8WVJ2 157 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 ADTRPQ96IZ2 230 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 B9D2Q9BPU9 175 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 SCPEP1Q9HB40 452 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 RABL2AQ9UBK7 228 aaPredicted RBP7.9□□□□□ -1.14
CPSF4-213ENST00000484112 RSL24D1Q9UHA3 163 aaKnown RBP7.9□□□□□ -1.14
CPSF4-213ENST00000484112 ZNF230Q9UIE0 474 aaPredicted RBP7.9□□□□□ -1.14
CPSF4-213ENST00000484112 RABL2BQ9UNT1 228 aa7.9□□□□□ -1.14
CPSF4-213ENST00000484112 SH2D7A6NKC9 451 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-213ENST00000484112 NCBP2LA6PVI3 153 aaKnown RBP7.89□□□□□ -1.15
CPSF4-213ENST00000484112 SULT1C2O00338 296 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 SSX5O60225 188 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 IGHG2P01859 326 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 CT45A6P0DMU7 189 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 CT45A5P0DMU8 189 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 CT45A7P0DMV0 189 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 RRASP10301 218 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 OR3A3P47888 321 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 TAS2R20P59543 309 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 ARPC4P59998 168 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 HNF4GQ14541 408 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 C9orf152Q5JTZ5 239 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 C5orf24Q7Z6I8 188 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 PDPNQ86YL7 162 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 CLVS1Q8IUQ0 354 aaPredicted RBP7.89□□□□□ -1.15
CPSF4-213ENST00000484112 FOXRED2Q8IWF2 684 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 FAM71E2Q8N5Q1 922 aa7.89□□□□□ -1.15
CPSF4-213ENST00000484112 COMMD1Q8N668 190 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms