RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 RPL39P5Q59GN2 51 aa12.94□□□□□ -0.34
COL2A1-206ENST00000483376 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
COL2A1-206ENST00000483376 GPX8Q8TED1 209 aa12.94□□□□□ -0.34
COL2A1-206ENST00000483376 C15orf40Q8WUR7 153 aa12.94□□□□□ -0.34
COL2A1-206ENST00000483376 SNAPC3Q92966 411 aa12.94□□□□□ -0.34
COL2A1-206ENST00000483376 RNF5Q99942 180 aa12.94□□□□□ -0.34
COL2A1-206ENST00000483376 LIN7CQ9NUP9 197 aaKnown RBP12.94□□□□□ -0.34
COL2A1-206ENST00000483376 OR2W1Q9Y3N9 320 aa12.94□□□□□ -0.34
COL2A1-206ENST00000483376 TRRAPQ9Y4A5 3859 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 H0YJW9 148 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 RBBP9O75884 186 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 OR8U9P0C7N5 309 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 ARPC4P59998 168 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 TAGLNQ01995 201 aaKnown RBP12.93□□□□□ -0.34
COL2A1-206ENST00000483376 MSMO1Q15800 293 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 ABCA11PQ4W5N1 156 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 FAM71E2Q8N5Q1 922 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 Q8N9W7 124 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 OR5AP2Q8NGF4 316 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 OR8U1Q8NH10 309 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
COL2A1-206ENST00000483376 OR2D2Q9H210 308 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 SDHAF2Q9NX18 166 aa12.93□□□□□ -0.34
COL2A1-206ENST00000483376 IGHG2P01859 326 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 PTHLHP12272 177 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 VDAC2P45880 294 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-206ENST00000483376 HNF4GQ14541 408 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 Q6ZS46 218 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 NPBQ8NG41 125 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 SGMS2Q8NHU3 365 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 NXF2Q9GZY0 626 aaKnown RBP12.92□□□□□ -0.34
COL2A1-206ENST00000483376 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 RABL2AQ9UBK7 228 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-206ENST00000483376 RABL2BQ9UNT1 228 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 SIGLEC9Q9Y336 463 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
COL2A1-206ENST00000483376 NDUFA3O95167 84 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 LUMP51884 338 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-206ENST00000483376 TAS2R46P59540 309 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 KRTAP10-3P60369 221 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 ACTBP60709 375 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 FAM131AQ6UXB0 335 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 PDPNQ86YL7 162 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 ZNF645Q8N7E2 425 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 ZNF383Q8NA42 475 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 GIMAP1Q8WWP7 306 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 ADTRPQ96IZ2 230 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 MIXL1Q9H2W2 232 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 RSL24D1Q9UHA3 163 aaKnown RBP12.91□□□□□ -0.34
COL2A1-206ENST00000483376 ZNF580Q9UK33 172 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 RNF150Q9ULK6 438 aa12.91□□□□□ -0.34
COL2A1-206ENST00000483376 FAM25AB3EWG3 89 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 FAM25CB3EWG5 89 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 FAM25GB3EWG6 89 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 OR5H8P0DN80 308 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
COL2A1-206ENST00000483376 CDK10Q15131 360 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 OVCH2Q7RTZ1 564 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 C5orf30Q96GV9 206 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 EXTL2Q9UBQ6 330 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 MRPS7Q9Y2R9 242 aaKnown RBP12.9□□□□□ -0.34
COL2A1-206ENST00000483376 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
COL2A1-206ENST00000483376 A3GALT2U3KPV4 340 aa12.9□□□□□ -0.34
COL2A1-206ENST00000483376 NCBP2LA6PVI3 153 aaKnown RBP12.89□□□□□ -0.35
COL2A1-206ENST00000483376 M0R1X1 148 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 HAX1O00165 279 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 CTDSP2O14595 271 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 NBR2O15453 112 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 KCNAB3O43448 404 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 SPDEFO95238 335 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 APOA2P02652 100 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 RCVRNP35243 200 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 THBS3P49746 956 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 F2RL1P55085 397 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 MRPS10P82664 201 aaKnown RBP12.89□□□□□ -0.35
COL2A1-206ENST00000483376 DYRK1AQ13627 763 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 MMDQ15546 238 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 DHRS11Q6UWP2 260 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 LAX1Q8IWV1 398 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 DDB2Q92466 427 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 RASL11BQ9BPW5 248 aa12.89□□□□□ -0.35
COL2A1-206ENST00000483376 RGS5O15539 181 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 PPYP01298 95 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 IGLV2-14P01704 120 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 HLA-DRB1P01911 266 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 RRASP10301 218 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 FCGR2CP31995 323 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 DUTP33316 252 aaKnown RBP12.88□□□□□ -0.35
COL2A1-206ENST00000483376 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 ZNF660Q6AZW8 331 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-206ENST00000483376 SNX29P2Q8IUI4 249 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 LYSMD2Q8IV50 215 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 ZBTB34Q8NCN2 500 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
COL2A1-206ENST00000483376 RBMX2Q9Y388 322 aaKnown RBP12.88□□□□□ -0.35
COL2A1-206ENST00000483376 IGKV1D-13A0A0B4J2D9 117 aa12.87□□□□□ -0.35
COL2A1-206ENST00000483376 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
COL2A1-206ENST00000483376 CTDSPLO15194 276 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms