RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TOLLIPQ9H0E2 274 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 LIN7CQ9NUP9 197 aaKnown RBP12.5□□□□□ -0.41
ATG4B-220ENST00000482507 RNF150Q9ULK6 438 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 WIPI2Q9Y4P8 454 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 TRAV20A0A0B4J274 112 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 CD55P08174 381 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 TLE1Q04724 770 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 SLC10A1Q14973 349 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 PYY3Q5JQD4 70 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 OR1L1Q8NH94 360 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 KLRC4-KLRK1H3BQV0 150 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 K7ENP7 123 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 NXPH2O95156 264 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 PPP1CBP62140 327 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 RPL30P62888 115 aaKnown RBP12.49□□□□□ -0.41
ATG4B-220ENST00000482507 ZNF146Q15072 292 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 OR2B11Q5JQS5 317 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 INO80CQ6PI98 192 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-220ENST00000482507 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
ATG4B-220ENST00000482507 DIDO1Q9BTC0 2240 aaKnown RBP12.48□□□□□ -0.41
ATG4B-220ENST00000482507 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 WNT9BO14905 357 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 GRPP07492 148 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 IDH3GP51553 393 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-220ENST00000482507 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 TBC1D28Q2M2D7 210 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 OR8G2PQ6IF36 304 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 IGFL2Q6UWQ7 119 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
ATG4B-220ENST00000482507 ABHD5Q8WTS1 349 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.41
ATG4B-220ENST00000482507 ABHD17AQ96GS6 310 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 RBKSQ9H477 322 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 SDF2L1Q9HCN8 221 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-220ENST00000482507 SMG1Q96Q15 3661 aaKnown RBP12.48□□□□□ -0.41
ATG4B-220ENST00000482507 NBEAQ8NFP9 2946 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 S100PP25815 95 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 TMEM41BQ5BJD5 291 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 FAM209BQ5JX69 171 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 TMEM14EPQ6UXP3 125 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 SLC25A40Q8TBP6 338 aa12.48□□□□□ -0.41
ATG4B-220ENST00000482507 ZNF71Q9NQZ8 489 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-220ENST00000482507 MAP1LC3B2A6NCE7 125 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 CEBPZOSA8MTT3 80 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 SOD3P08294 240 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 P0C879 139 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 G6PCP35575 357 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 HBG1P69891 147 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 HBG2P69892 147 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 SERF2P84101 59 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 TNFRSF9Q07011 255 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 PSG7Q13046 419 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 CXorf67Q86X51 503 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-220ENST00000482507 NANOS1Q8WY41 292 aaKnown RBP12.47□□□□□ -0.41
ATG4B-220ENST00000482507 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 DKK4Q9UBT3 224 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 PIGBOS1A0A0B4J2F0 54 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 B4DEV8 164 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 C12orf77C9JDV5 145 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 SH2D1BO14796 132 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 KRASP01116 189 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 MPV17P39210 176 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 OR3A1P47881 315 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 RND2P52198 227 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-220ENST00000482507 TBR1Q16650 682 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 ACSM6Q6P461 480 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 Q6ZR03 302 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 ZNF826PQ6ZT77 177 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 Q8IYB0 196 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 ZNF808Q8N4W9 903 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-220ENST00000482507 OR52L2PQ8NGH6 319 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 FRZBQ92765 325 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 FAM210BQ96KR6 192 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 POLDIP2Q9Y2S7 368 aa12.47□□□□□ -0.41
ATG4B-220ENST00000482507 PHOX2AO14813 284 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.41
ATG4B-220ENST00000482507 CLDN1O95832 211 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 HAND1O96004 215 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-220ENST00000482507 IGHV1-2P23083 117 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 LINC00205P59089 165 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 CD81P60033 236 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 RPS16P62249 146 aaKnown RBP12.46□□□□□ -0.41
ATG4B-220ENST00000482507 ZNF816Q0VGE8 651 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-220ENST00000482507 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 WDR25Q64LD2 544 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-220ENST00000482507 ZADH2Q8N4Q0 377 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 TMEM178AQ8NBL3 297 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 OR2D2Q9H210 308 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 CLN8Q9UBY8 286 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 VAX2Q9UIW0 290 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 TINAGQ9UJW2 476 aa12.46□□□□□ -0.41
ATG4B-220ENST00000482507 LYZL6O75951 148 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 FAM87AP0C7U9 286 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms