RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 GSTT2P0CG29 244 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 GSTT2BP0CG30 244 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
HMGN1-213ENST00000482192 CNTFRP26992 372 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 SCAND1P57086 179 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 CFHR3Q02985 330 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 FOXE3Q13461 319 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 C5orf64Q2M2E5 130 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 TIMM50Q3ZCQ8 353 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 IGSF11Q5DX21 431 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 CXorf66Q5JRM2 361 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-213ENST00000482192 LIN54Q6MZP7 749 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 GLDNQ6ZMI3 551 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-213ENST00000482192 Q6ZS49 121 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-213ENST00000482192 LGALS14Q8TCE9 139 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 MAFIPQ8WZ33 124 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 OR51J1Q9H342 316 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 ZNF230Q9UIE0 474 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-213ENST00000482192 ETV7Q9Y603 341 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 VWFP04275 2813 aa9.34□□□□□ -0.91
HMGN1-213ENST00000482192 A0A087WXM4 84 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 PROP1O75360 226 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 DUS4LO95620 317 aaKnown RBP9.33□□□□□ -0.92
HMGN1-213ENST00000482192 IGHG4P01861 327 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 TFAP2AP05549 437 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 ELANEP08246 267 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 GSTP1P09211 210 aaKnown RBP9.33□□□□□ -0.92
HMGN1-213ENST00000482192 DTYMKP23919 212 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 PITPNAQ00169 270 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 CDNFQ49AH0 187 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 HACD4Q5VWC8 232 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 C8orf86Q6ZUL3 223 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 ZNF695Q8IW36 515 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 DRAXINQ8NBI3 349 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-213ENST00000482192 KLHL30-AS1Q8NEE0 82 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 TSPAN14Q8NG11 270 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 RNF5Q99942 180 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 GINS4Q9BRT9 223 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 RNF167Q9H6Y7 350 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 RHBDL2Q9NX52 303 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 BOLA1Q9Y3E2 137 aa9.33□□□□□ -0.92
HMGN1-213ENST00000482192 IGHV7-81A0A0B4J1V7 117 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 M0R1X1 148 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 RRHO14718 337 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 ATP6V0E1O15342 81 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 TMEM127O75204 238 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 APOA2P02652 100 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 RPLP1P05386 114 aaKnown RBP9.32□□□□□ -0.92
HMGN1-213ENST00000482192 CLEC2LP0C7M8 214 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 OR8U9P0C7N5 309 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 IGLL1P15814 213 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 THBS3P49746 956 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 GNG2P59768 71 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 PLGLAQ15195 96 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 IDNKQ5T6J7 187 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 ETV3LQ6ZN32 361 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 REC114Q7Z4M0 266 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 PDPNQ86YL7 162 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
HMGN1-213ENST00000482192 LINC00482Q8N8I6 264 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 ZNF383Q8NA42 475 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 OR8U1Q8NH10 309 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 RCC1LQ96I51 464 aaKnown RBP9.32□□□□□ -0.92
HMGN1-213ENST00000482192 OR2D2Q9H210 308 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 DCSTAMPQ9H295 470 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 PARP11Q9NR21 331 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 NECAP2Q9NVZ3 263 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 ELF5Q9UKW6 265 aaPredicted RBP9.32□□□□□ -0.92
HMGN1-213ENST00000482192 GAB2Q9UQC2 676 aa9.32□□□□□ -0.92
HMGN1-213ENST00000482192 IGKV1D-8A0A087WSZ0 117 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 TMEM235A6NFC5 223 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 SPDEFO95238 335 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 IGKV1-16P04430 117 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 PSMB8P28062 276 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 MYCNOSP40205 109 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 CDX1P47902 265 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-213ENST00000482192 ZNF260Q3ZCT1 412 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 ZNF660Q6AZW8 331 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-213ENST00000482192 C18orf65Q6ZTR6 163 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 CROCCP3Q8IVE0 287 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 H1FOOQ8IZA3 346 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-213ENST00000482192 TSNAXQ99598 290 aaKnown RBP9.31□□□□□ -0.92
HMGN1-213ENST00000482192 ST6GALNAC5Q9BVH7 336 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 FBXL15Q9H469 300 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 SDHAF2Q9NX18 166 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 RBM7Q9Y580 266 aaKnown RBP9.31□□□□□ -0.92
HMGN1-213ENST00000482192 WSB1Q9Y6I7 421 aa9.31□□□□□ -0.92
HMGN1-213ENST00000482192 A0A0A6YYH2 397 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 A6NJ64 397 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 G3V318 75 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 AIREO43918 545 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 CTXN2P0C2S0 81 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 PPIFP30405 207 aaKnown RBP9.3□□□□□ -0.92
HMGN1-213ENST00000482192 CX3CL1P78423 397 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 TAGLNQ01995 201 aaKnown RBP9.3□□□□□ -0.92
HMGN1-213ENST00000482192 PSG5Q15238 335 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms