RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 CHST1O43916 411 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 CLDN1O95832 211 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 IGKV1-5P01602 117 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 SPP1P10451 314 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 EPHA1P21709 976 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 LPAR6P43657 344 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 EDDM3BP56851 147 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 ZNF788Q6ZQV5 615 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 FGFRL1Q8N441 504 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 CALYQ9NYX4 217 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 GAB2Q9UQC2 676 aa13.09□□□□□ -0.31
RXRA-202ENST00000481739 MYO18BQ8IUG5 2567 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 FLNCQ14315 2725 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 TRAV38-1A0A0B4J264 116 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 IGSF23A1L1A6 192 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 FAM24AA6NFZ4 105 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 KIAA1324LA8MWY0 1029 aaPredicted RBP13.08□□□□□ -0.32
RXRA-202ENST00000481739 SIGLEC5O15389 551 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 SYNGR2O43760 224 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 MED6O75586 246 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 CGB3P0DN86 165 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 CGB7P0DN87 165 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 NHLH2Q02577 135 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 MORN2Q502X0 79 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 RFESDQ8TAC1 157 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 TCTEX1D2Q8WW35 142 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 MAGT1Q9H0U3 335 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 LINC00574Q9H8X3 128 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 SAP30LQ9HAJ7 183 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 CISD1Q9NZ45 108 aaKnown RBP13.08□□□□□ -0.32
RXRA-202ENST00000481739 RNF150Q9ULK6 438 aa13.08□□□□□ -0.32
RXRA-202ENST00000481739 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
RXRA-202ENST00000481739 DEFB108AA8MXU0 73 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 LGALS8O00214 317 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 FBXO24O75426 580 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 DFFBO76075 338 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 GPR12P47775 334 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 ARHGDIBP52566 201 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 F2RL1P55085 397 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 EFNB3Q15768 340 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 PXDC1Q5TGL8 231 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 SPAG16Q8N0X2 631 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.07□□□□□ -0.32
RXRA-202ENST00000481739 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 GAFA1Q96PS6 74 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 MS4A5Q9H3V2 200 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 PSG11Q9UQ72 335 aa13.07□□□□□ -0.32
RXRA-202ENST00000481739 KBTBD11-OT1A0A1B0GTJ5 212 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 ZNF729A6NN14 1252 aaPredicted RBP13.06□□□□□ -0.32
RXRA-202ENST00000481739 TRIM77I1YAP6 450 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 C19orf84I3L1E1 186 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■□□□ 13.8
RXRA-202ENST00000481739 LY86O95711 162 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 CYB5R3P00387 301 aaPredicted RBP13.06□□□□□ -0.32
RXRA-202ENST00000481739 M6PRP20645 277 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
RXRA-202ENST00000481739 KIR2DS2P43631 304 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 LOXL3P58215 753 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 PJVKQ0ZLH3 352 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 MIDNQ504T8 468 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 COMMD1Q8N668 190 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 CORO2AQ92828 525 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 GNPNAT1Q96EK6 184 aaPredicted RBP13.06□□□□□ -0.32
RXRA-202ENST00000481739 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 WFDC1Q9HC57 220 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 CLN8Q9UBY8 286 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 CACFD1Q9UGQ2 172 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 KIAA2026Q5HYC2 2103 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
RXRA-202ENST00000481739 DANCRP0C864 163 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 P0C879 139 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 SULT1A1P50225 295 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 CCL8P80075 99 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 Q6ZRM9 215 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 BSCL2Q96G97 398 aaPredicted RBP13.06□□□□□ -0.32
RXRA-202ENST00000481739 DCTN5Q9BTE1 182 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 DYNLRB1Q9NP97 96 aa13.06□□□□□ -0.32
RXRA-202ENST00000481739 IGHV3-43A0A0B4J1X8 118 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 FAM90A9PA6NNJ1 464 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 UMAD1C9J7I0 102 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 RAB29O14966 203 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 ST8SIA5O15466 376 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 TXNL1O43396 289 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 TMEM50AO95807 157 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 CRYZL1O95825 349 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 IGHV3-43DP0DP04 118 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 PAX9P55771 341 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 RPL30P62888 115 aaKnown RBP13.05□□□□□ -0.32
RXRA-202ENST00000481739 Q3ZCU0 254 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 ZNF672Q499Z4 452 aaPredicted RBP13.05□□□□□ -0.32
RXRA-202ENST00000481739 OR10A7Q8NGE5 316 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 OR5C1Q8NGR4 320 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 ATP5SQ99766 215 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.05□□□□□ -0.32
RXRA-202ENST00000481739 GFOD1Q9NXC2 390 aa13.05□□□□□ -0.32
RXRA-202ENST00000481739 hADV38S2A0JD32 116 aa13.04□□□□□ -0.32
RXRA-202ENST00000481739 B9A039 149 aa13.04□□□□□ -0.32
RXRA-202ENST00000481739 SCAF4O95104 1147 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms