RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 BIN3Q9NQY0 253 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 HTD2P86397 168 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 FFAR4Q5NUL3 377 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 UQCC3Q6UW78 93 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 SSX3Q99909 188 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 SRRM5B3KS81 715 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 J3QR06 171 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 DYNLT3P51808 116 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 TOR2AQ5JU69 321 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 FAM166AQ6J272 317 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 BPIFCQ8NFQ6 507 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 SLC45A2Q9UMX9 530 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 ZNF146Q15072 292 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 OR7C2O60412 319 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 ZG16O60844 167 aa16.25■□□□□ 0.19
CCM2-214ENST00000481194 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCM2-214ENST00000481194 ACAA1P09110 424 aaPredicted RBP16.24■□□□□ 0.19
CCM2-214ENST00000481194 SAV1Q9H4B6 383 aaPredicted RBP16.24■□□□□ 0.19
CCM2-214ENST00000481194 PITX3O75364 302 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 RBP4P02753 201 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 TMEM187Q14656 261 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 GNG13Q9P2W3 67 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 RPH3ALQ9UNE2 315 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 DVL1O14640 695 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 SNRNP70P08621 437 aaKnown RBP16.24■□□□□ 0.19
CCM2-214ENST00000481194 NPY1RP25929 384 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 SSTR5P35346 364 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 RHOBP62745 196 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 ZNF818PQ6ZRF7 136 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 SLX1AQ9BQ83 275 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 TNFSF18Q9UNG2 199 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 UBE2G1P62253 170 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 FAM216BQ8N7L0 139 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 CHODLQ9H9P2 273 aa16.24■□□□□ 0.19
CCM2-214ENST00000481194 CORTO00230 105 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 USF1P22415 310 aaPredicted RBP16.23■□□□□ 0.19
CCM2-214ENST00000481194 ATP5IP56385 69 aaPredicted RBP16.23■□□□□ 0.19
CCM2-214ENST00000481194 TIGITQ495A1 244 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 DRAM1Q8N682 238 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 PITPNC1Q9UKF7 332 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 DEDDO75618 318 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 OR4C13Q8NGP0 309 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 PLSCR3Q9NRY6 295 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 MED9Q9NWA0 146 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 CEP192Q8TEP8 1941 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 GOSR1O95249 250 aa16.23■□□□□ 0.19
CCM2-214ENST00000481194 PUS1Q9Y606 427 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCM2-214ENST00000481194 TRBV6-7A0A0A0MS04 114 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 WISP1O95388 367 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 REG1BP48304 166 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 PPOXP50336 477 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 C9orf62Q8N4C0 152 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 OR13A1Q8NGR1 328 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 SAT2Q96F10 170 aaPredicted RBP16.22■□□□□ 0.19
CCM2-214ENST00000481194 GRAMD2BQ96HH9 432 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 OR2T6Q8NHC8 308 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 TIMM8BQ9Y5J9 83 aaPredicted RBP16.22■□□□□ 0.19
CCM2-214ENST00000481194 RPL27AP46776 148 aaKnown RBP16.22■□□□□ 0.19
CCM2-214ENST00000481194 PRR30Q53SZ7 412 aaPredicted RBP16.22■□□□□ 0.19
CCM2-214ENST00000481194 GALNT14Q96FL9 552 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 NPBWR1P48145 328 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 SPINK9Q5DT21 86 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 COA4Q9NYJ1 87 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 TIMM9Q9Y5J7 89 aa16.22■□□□□ 0.19
CCM2-214ENST00000481194 SIGLEC5O15389 551 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 PTBP3O95758 552 aaKnown RBP16.21■□□□□ 0.19
CCM2-214ENST00000481194 RPL8P62917 257 aaKnown RBP16.21■□□□□ 0.19
CCM2-214ENST00000481194 ANKRD55Q3KP44 614 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 ASCL4Q6XD76 172 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 PLPPR1Q8TBJ4 325 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 MMP26Q9NRE1 261 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 TRAV24A0A0B4J272 114 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 YPEL1O60688 119 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 DPPA3Q6W0C5 159 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 RELL2Q8NC24 303 aaPredicted RBP16.21■□□□□ 0.19
CCM2-214ENST00000481194 YPEL2Q96QA6 119 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 PARP12Q9H0J9 701 aaKnown RBP16.21■□□□□ 0.19
CCM2-214ENST00000481194 ARF6P62330 175 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 ZNF672Q499Z4 452 aaPredicted RBP16.21■□□□□ 0.19
CCM2-214ENST00000481194 FGFRL1Q8N441 504 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 SDK2Q58EX2 2172 aa16.21■□□□□ 0.19
CCM2-214ENST00000481194 CNOT1A5YKK6 2376 aaKnown RBP16.21■□□□□ 0.19
CCM2-214ENST00000481194 KDF1Q8NAX2 398 aaPredicted RBP16.21■□□□□ 0.19
CCM2-214ENST00000481194 ADAM10O14672 748 aa16.21■□□□□ 0.18
CCM2-214ENST00000481194 MT-ND4LP03901 98 aa16.21■□□□□ 0.18
CCM2-214ENST00000481194 HSD17B13Q7Z5P4 300 aaPredicted RBP16.21■□□□□ 0.18
CCM2-214ENST00000481194 FAM215AQ9Y5M1 114 aa16.21■□□□□ 0.18
CCM2-214ENST00000481194 PCNPQ8WW12 178 aaKnown RBP16.2■□□□□ 0.18
CCM2-214ENST00000481194 RHOVQ96L33 236 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 RPL11P62913 178 aaKnown RBP16.2■□□□□ 0.18
CCM2-214ENST00000481194 SLC24A4Q8NFF2 622 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 IGKV1-12A0A0C4DH73 117 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 IGKV1D-12P01611 117 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 PDGFAP04085 211 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 TMEM11P17152 192 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 EFNA4P52798 201 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 SPNS3Q6ZMD2 512 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 OR52M1Q8NGK5 317 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 OR4F5Q8NH21 305 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 OR4F4Q96R69 305 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms